Gene PHATR_36981 details

Gene Information

• Locus tag: PHATR_36981
• Symbol: HSP20C
• ID: 7204748
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011679
• Strand: +
• Start bp: 804122
• End bp: 804667
• Gene Length: 546 bp
• Protein Length: 181 aa
• GC content: 46%
• Product: heat shock protein Hsp20
• Protein accession: XP_002185787
• Protein GI: 219121113

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCTCTG CGGCTAATTC TTGGAGCTTT GAACGTATGC CTTATGGGAT ATTGAGTCCG 
ATGGTCCAAC ATGCCTATTC CCCGGCAGAA CGACTTCTTC GCCAGTCCTA TGCTCCCACG 
AATCGCGAAT TAGCAGATTT TAGCAGTTAT CCACGTTGCG AAGTGACGGA CAATGATGAG 
AAGTTTGAAC TTGCTATTGC CGTTCCGGGT ATTGATTCTA AGAACATCGA TGTCAGTGTC 
AACGACAACA TTCTTTCAAT CCAAGGTCAC CAAGAATCCA AGAGTGGGAC GTATAGCTTC 
ACATCTACAT TTTCTCAGAG CTACACGCTA GATCCGACTG TTGAGAGCGA CAAGGTCAAC 
GCAAACCTCA ACAACGGAAT ACTCGTTATT TCGGGCCCCA AAGACTTGGA AAAGCTAGGG 
AGGCGAGTTC GAAAGATTCC TATTTTGACC GATAGCTCTA GCCTTGTTCA AAGCGGTGAG 
CAAACATCTG ATGTGGCACA GGATCACAAA GAAATCAAGA TTGCAACGAA CGACGACACC 
AAATAG 

 

Protein sequence

MASAANSWSF ERMPYGILSP MVQHAYSPAE RLLRQSYAPT NRELADFSSY PRCEVTDNDE 
KFELAIAVPG IDSKNIDVSV NDNILSIQGH QESKSGTYSF TSTFSQSYTL DPTVESDKVN 
ANLNNGILVI SGPKDLEKLG RRVRKIPILT DSSSLVQSGE QTSDVAQDHK EIKIATNDDT 
K