Gene PHATR_36848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_36848 
Symbol 
ID7204671 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp498988 
End bp500362 
Gene Length1375 bp 
Protein Length424 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185900 
Protein GI219121349 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATCT TGGCGCGATC CTTGATTCAA ATCATGCTGA TCTTTTCTAT TGTTCTTTCG 
CTGGGCTGGG GCATGGTCGG GTTGTCATTG GATCCTTACG GGATAATCTC CATCCTGGGC
TTTACGGCAT TACTCGTTAC GTTCGGTCAT GTAAGTTTTT TCTGTGCTGG AATTATTATG
GCGACTCGCA TTACGAACCT TTTTTTTGAT CCTGGTACTC ACGGAATGGG TTTGATAATC
CTTTTTGCAG ACCATGTACA ATTGGAATCG CATCCCCTTT GCGGCCACAA ATTTGTACAC
AGCTTTGTGT GCAATGCGCT GTACCGCCGA TATAACGATT CTTGGACTCA CTAGCATTAT
TGTGGCCTTT TGTTGGTGCG TGATCTGGTC CATGGCCTTT ATAGGCATTG TGAATTCCTT
CAACAGTAAA GATTGTGACC AGGAGGATGT CTGTGAACCG CACGTGCGCA GCAGTCACAT
TCCGCTGTAC CTGCTGCTGG TGTTTTCCTT CCACTGGACC AATGCGGTCA TCAAGAACAT
CGTTCGAGTC ACAGTGGCGA GTGCGATTGG TACCTGGTGG TTTTACCCCC AAGAGTTGCG
TACCTTTTGC AGCCCCGCCG TACTACGACC ACTGACGCGT TCATTGACGA CGAGCTTGGG
CTCTATTTGT CTGGGTAGTC TGATTATTCG ACCGGCACAG GCTTTGTCTG TACTGGGTAC
TTTTTGTTGC TGCATGTTTG GTGGGGGACC GGAAGGCACC GGCAGTGCGT GTATGAATCA
TGCGCAGCGG AGCAAGAGGA TTGCGGACGA GGACAAGAAT GAAGTGATCA CTGACGAGCC
CAACGGGGAT CCCGATTCAG CAGCGGATAC CGTCGGTCTC TGCGATCGCG CGTGCGGTGT
GGTGGGAAGG ATATCGCTGC AACTACGTGC GTGCAACCGA TGGTCGTTTA CGTATATTGG
TATGTACGGC TACGGCTTTA CCGATGCTGG CAAGAAGGCG ATTCAATTGT TCGAAACGCG
CGAATGGATG GACGTGGTAC GGGACAATTT GATTCGGAAT GTGCTGCTCT TATCGAGTAT
GATAATTGGC GGGAGCGCCG GTGTCTTTGC GGTAGTAGTG GAAGAAACGG ACGGATACGA
ATTCTCCTCT TTTCACAAAC CAATTATTAC GGCCTTTTTG ATCGGTTCGG TGATTGGCTT
TATCCTGAGC GACATTTTAT TGTTGGGTGT GGTGGGCAGT GCGGTGAATA CCGTCCTGGT
GTGCTTTGCG GCCGGCCCGT TCGAGTTCGA CAAGAATCAC CCGCAACTGA GTCGCGAGAT
GCGCGACGCA TGGAGTCAAC AGGTATGGGA GCCAACCGTG CACGCGGTGG TGTGA
 
Protein sequence
MLILARSLIQ IMLIFSIVLS LGWGMVGLSL DPYGIISILG FTALLVTFGH TMYNWNRIPF 
AATNLYTALC AMRCTADITI LGLTSIIVAF CWCVIWSMAF IGIVNSFNSK DCDQEDVCEP
HVRSSHIPLY LLLVFSFHWT NAVIKNIVRV TVASAIGTWW FYPQELRTFC SPAVLRPLTR
SLTTSLGSIC LGSLIIRPAQ ALSVLGTFCC CMFGGGPEGT GSACMNHAQR SKRIADEDKN
EVITDEPNGD PDSAADTVGL CDRACGVVGR ISLQLRACNR WSFTYIGMYG YGFTDAGKKA
IQLFETREWM DVVRDNLIRN VLLLSSMIIG GSAGVFAVVV EETDGYEFSS FHKPIITAFL
IGSVIGFILS DILLLGVVGS AVNTVLVCFA AGPFEFDKNH PQLSREMRDA WSQQVWEPTV
HAVV