Gene PHATR_33214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_33214 
Symbol 
ID7204342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp323273 
End bp323842 
Gene Length570 bp 
Protein Length189 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186325 
Protein GI219113483 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTTT TGCAAAACGT TCACGGAGCG AGAGCAACAG CTGCTGCTTG GCGTCTAACC 
CGTACCAACG GTGTTTCCGG ACCACGTCGA AGCTTCAGTG ACTGGAACGA GCGAGGACAC
GACATAACGT ACGAATCATT GACTTTTGGT GAAAGGCCCA AAATAATACT GCAGGGTTAC
GCACCGACCG GCTTTGATGT CTTGAATACT GTCAAGAAAA TAGACGAAAA CGAGCAGATT
GAATCCGGTA CAGTTCACAT GAACGGAAGT ATCATGGCGT TTCCTTTTGG GTGCTTCCTG
TGGGGTGTTA CCAAGCCGGA GGATGTCACA CTGGAGTCCA TCGCGTCTGT GTTCCTGCAC
AAACCAAGTT TAGAATACCT ATTCATTGGA TGCAACGGAC CCATTCCGCT ACCGCAAATT
GATCGGATCA AGATAGGGTT GAGCAAGAAG AACTGCGTGG TAGAAAAGAT GAACATATCA
AACGCAATTG GTACCTTTAA CATTTTGAAT GCAGAAGACC GGCAAGTGGC AGTTGCCTTA
ATTTTGGATA AGGGTGATGA AACCGAATAG
 
Protein sequence
MSVLQNVHGA RATAAAWRLT RTNGVSGPRR SFSDWNERGH DITYESLTFG ERPKIILQGY 
APTGFDVLNT VKKIDENEQI ESGTVHMNGS IMAFPFGCFL WGVTKPEDVT LESIASVFLH
KPSLEYLFIG CNGPIPLPQI DRIKIGLSKK NCVVEKMNIS NAIGTFNILN AEDRQVAVAL
ILDKGDETE