Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_33128 |
Symbol | |
ID | 7203953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | + |
Start bp | 124256 |
End bp | 125212 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186000 |
Protein GI | 219112833 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0835222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATAC TACCTGCAAA GCAAAGCTTT TGCTGCCTTG TTCTATTGGT GTTGATGACC AGCCATTACA TAGTATTCCA TTTTCACTAC GTTCGGAGTA CCCCTGCGGT AGTATCGGAA TTCCAAACCA GGGAAGGGAA GACTCGTATC TCCTCAAATC TGCACCAAGA ACCATTTGAT CGGTTGTCTT TCCTCACATG GGAGATGCAT CCGGGCTCCC AAAAGATTCA CCAGATTGGT AGGAGGCCAC GTCTGTTGAT AGCCCAAACG GTGTCCAACT TTTATACGCC CTTGTTGGTT GCTGGTCAGC CAGTGAATCA GGCCTACGCA AGAGCATATG GTCACGATTA CGTCGTTGCG AGAGGCATTT ACCTGGTGGA CGAAAGACGG AATGAAACGC AGATGACCGC ACCGGACTCA CGAGCAGCGT ACAACAAAAT TGCTCTTTTG AGCTACGCCT TGCGTGAGGG AAAGTACGAC AAGCTGCTGG TGCTAGATTC TGACGCCATC ATCCGCGATT TTGACGTAGA TTTTGCCACA TACGGATATG ATCCGGACAT TCTATTGTTT GCCCAGTCGG TCGGTTCAGG AAATCCAACA AACTATTGGG ACGTGAACAA CGGAGTGACG CTTTGGAATC TACGTCACGA CTCGTTCGTT TCAATATGGT TCGAATGGTA TCGACGTTCG GTGGAAAAAG TGTATCGGGG TTTCAGGGAT GAAGACCAAT CAGTATTGCA TGAGGTTTTG AAAGAGATGC CGGACGAAAG TCGTCCGGTA CGCGGGGTGA ACTACTTTTG CTGTGTCTTG GGATCTTTAA TCCAGCACTT CCCTCGTACA AACCACCGAG TTTTCACTGT GATGGCAGAT TCCCGTTTGC AAAGCTTGAA GGCTGCCGCT AATGCTACTT TTGTACACTA TGCTGCGCTA ATTAATCGAA CGGCCACTGA AGATTAA
|
Protein sequence | MKILPAKQSF CCLVLLVLMT SHYIVFHFHY VRSTPAVVSE FQTREGKTRI SSNLHQEPFD RLSFLTWEMH PGSQKIHQIG RRPRLLIAQT VSNFYTPLLV AGQPVNQAYA RAYGHDYVVA RGIYLVDERR NETQMTAPDS RAAYNKIALL SYALREGKYD KLLVLDSDAI IRDFDVDFAT YGYDPDILLF AQSVGSGNPT NYWDVNNGVT LWNLRHDSFV SIWFEWYRRS VEKVYRGFRD EDQSVLHEVL KEMPDESRPV RGVNYFCCVL GSLIQHFPRT NHRVFTVMAD SRLQSLKAAA NATFVHYAAL INRTATED
|
| |