Gene PHATR_33128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_33128 
Symbol 
ID7203953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp124256 
End bp125212 
Gene Length957 bp 
Protein Length318 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186000 
Protein GI219112833 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0835222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC TACCTGCAAA GCAAAGCTTT TGCTGCCTTG TTCTATTGGT GTTGATGACC 
AGCCATTACA TAGTATTCCA TTTTCACTAC GTTCGGAGTA CCCCTGCGGT AGTATCGGAA
TTCCAAACCA GGGAAGGGAA GACTCGTATC TCCTCAAATC TGCACCAAGA ACCATTTGAT
CGGTTGTCTT TCCTCACATG GGAGATGCAT CCGGGCTCCC AAAAGATTCA CCAGATTGGT
AGGAGGCCAC GTCTGTTGAT AGCCCAAACG GTGTCCAACT TTTATACGCC CTTGTTGGTT
GCTGGTCAGC CAGTGAATCA GGCCTACGCA AGAGCATATG GTCACGATTA CGTCGTTGCG
AGAGGCATTT ACCTGGTGGA CGAAAGACGG AATGAAACGC AGATGACCGC ACCGGACTCA
CGAGCAGCGT ACAACAAAAT TGCTCTTTTG AGCTACGCCT TGCGTGAGGG AAAGTACGAC
AAGCTGCTGG TGCTAGATTC TGACGCCATC ATCCGCGATT TTGACGTAGA TTTTGCCACA
TACGGATATG ATCCGGACAT TCTATTGTTT GCCCAGTCGG TCGGTTCAGG AAATCCAACA
AACTATTGGG ACGTGAACAA CGGAGTGACG CTTTGGAATC TACGTCACGA CTCGTTCGTT
TCAATATGGT TCGAATGGTA TCGACGTTCG GTGGAAAAAG TGTATCGGGG TTTCAGGGAT
GAAGACCAAT CAGTATTGCA TGAGGTTTTG AAAGAGATGC CGGACGAAAG TCGTCCGGTA
CGCGGGGTGA ACTACTTTTG CTGTGTCTTG GGATCTTTAA TCCAGCACTT CCCTCGTACA
AACCACCGAG TTTTCACTGT GATGGCAGAT TCCCGTTTGC AAAGCTTGAA GGCTGCCGCT
AATGCTACTT TTGTACACTA TGCTGCGCTA ATTAATCGAA CGGCCACTGA AGATTAA
 
Protein sequence
MKILPAKQSF CCLVLLVLMT SHYIVFHFHY VRSTPAVVSE FQTREGKTRI SSNLHQEPFD 
RLSFLTWEMH PGSQKIHQIG RRPRLLIAQT VSNFYTPLLV AGQPVNQAYA RAYGHDYVVA
RGIYLVDERR NETQMTAPDS RAAYNKIALL SYALREGKYD KLLVLDSDAI IRDFDVDFAT
YGYDPDILLF AQSVGSGNPT NYWDVNNGVT LWNLRHDSFV SIWFEWYRRS VEKVYRGFRD
EDQSVLHEVL KEMPDESRPV RGVNYFCCVL GSLIQHFPRT NHRVFTVMAD SRLQSLKAAA
NATFVHYAAL INRTATED