Gene PHATR_13537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_13537 
Symbol 
ID7204623 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp263626 
End bp264594 
Gene Length969 bp 
Protein Length290 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185849 
Protein GI219121243 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.175423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CACATATCGC AGAGTCGGGA TTCCACGACA AAACTCTTGC TTCGATTGTC TGATGGACTA 
GAAGTGGAGA CAGTGATAAT CCCATGGACT GGGGGGCGTA GTACCCTCTG CGTGAGTTCC
CAAGTAGGAT GTCGACAAGG TAAAGTAGAT GACACGGTCC CACCGCTCTT CATCGTTCAT
CGTTGCGTAT GGCGTCGTCC TCAATTCCGG TTTTATAACT ACTTTTTCGT TCCAGGATGC
ACTTTTTGCG CAACGGGTCG AATGGGAAAG CTAAGGTCGC TAAATGCGGA TGAGATTTTG
GCACAGCTAT TCTTTGCTCG GAAGATCTGT CGACAAAAGA ATCTACCACC AGTCACGAAC
GTCGTCTTCA TGGGGATGGG TGAACCTGCC GATAACAAAG ATGCTGTGAT ACGGGCTACC
GACATAATGA CCACTCGGGA ACTATTTCAA TTGTCTGCAT CTAAAGTCAC GGTTTCCACT
GTGGCTCCCA CGCCCGATTC TTTCCTTCAA TTCGCCCATG CGCATTGCGT TTTAGCCTGG
TCCGTACACG CGGCCAATGA TGAGTTGCGA CGCCAATTAG TACCCACCAC AAAACATGCC
ATGACAGAAT TGCGGCAAGG TCTAATAGAT ACGCTGCTCA TTCGACCACA CAATTTTCGA
ACAACAATGC TTGAAGTGGC GCTTATTTCG GGGATCAACG ATTCGGAAAA AGAGGCTGAC
GAGTTGGTCG ATTTTGCCCA GGTCATCATC GACGAGGTTC CTGGATGTAA GCTGGTTGTC
AATTTGATTC CTTTCAACGA CATTGGCCAA AACAGATACA CGAAACCTAG CATGGAAGCC
GTGTCCGTGT TCCAAAAGCG TTTGCGCGAG TTCGGTCTCG TTGCTCATAT CCGAACCACT
AGGGGAGACG ACGAATCTGC AGCGTGTGGC CAACTCGCCA CAAACAAGCA AAAACAGAGA
GTATTCTAA
 
Protein sequence
HISQSRDSTT KLLLRLSDGL EVETVIIPWT GGRSTLCVSS QVGCRQGCTF CATGRMGKLR 
SLNADEILAQ LFFARKICRQ KNLPPVTNVV FMGMGEPADN KDAVIRATDI MTTRELFQLS
ASKVTVSTVA PTPDSFLQFA HAHCVLAWSV HAANDELRRQ LVPTTKHAMT ELRQGLIDTL
LIRPHNFRTT MLEVALISGI NDSEKEADEL VDFAQVIIDE VPGCKLVVNL IPFNDIGQNR
YTKPSMEAVS VFQKRLREFG LVAHIRTTRG DDESAACGQL ATNKQKQRVF