Gene PHATR_10628 details

Gene Information

• Locus tag: PHATR_10628
• ID: 7204194
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: +
• Start bp: 605563
• End bp: 607759
• Gene Length: 2197 bp
• Protein Length: 575 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002186091
• Protein GI: 219113015

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GATGGCCACA CCATTCACCA GTATTTGCGC GGCCGCTTTC TCGGAAAAGG CGGGTTCGCC 
AAAGTATACT TGTGCACCGC TCTGGACACA TCCAAACAGT ACGCGGTCAA GATCGTACCA 
AAGGCGAATC TAGTCAAAGC GCGAGCGCGA CACAAGGTTT GTTACTGATT CTCAGTGCAC 
ATTATCTACT TTTCCCTAGT TTCGACGCTC ACTTACTTTC TATCCCTCGC AGTTGCAAAC 
CGAAATAAAA ATTCACCGCA CACTCAAGCA TCCCAACATT TGCGAGTACA AACATTTCTT 
TGAGGACCGC AACAACTGCT ACATCCTTTT GGAGCTCTGT CACAATCAGA CTCTAAATGA 
AATGATCAAA CGTCGGAAAA GATTGACCGA ACCAGAAGCG GCTCTGTTTA TGAATCATCT 
TCTCGATGCA GTCAAGTACA TGCACCTGAA GAATGTAATT CACCGAGACT TAAAACTCGG 
AAACTTGTTT TTGGACCGAC ATCTGAACGT CAAGGTTGGA GATTTGGGCT TAGCAACGAT 
TTTAGAACAT CCCGAAGAAA AGCGCAAGAC TATCTGCGGA ACCCCGAACT ACATTGCTCC 
CGAGATCATT CAGGGAGACA AGGCCACCAG GGGGTATTCG TTCGAAGTTG ACGTATGGTC 
CATGGGGGTT ATCCTGTTTA CAATTCTTGT TGGAAAGCCG CCGTATGAAG CGAAGGACGT 
CAAAGCCACT TACCAACGCA TTTTGGCCAA CGAATATTCG TTCCCCAACA ATGTAGAACT 
CTCGTTGGAT GCAAAAGACT TAATTCGGAG CATGCTACGC TCCACACCAT GCGAACGGTA 
AGGTCGTCAT TCGTTAGTTC TTGACTGATG CATTGTAAAT TTCAATACGT AGAGGCTAAT 
CTTTTCTTTC TACAGTCTGT CCCTTAAGGA GATTGGAAGT CACCGGTTCT TGTCCATTAG 
GAACACACCA CTAAACATCC CTTCAAACGC CACTCACTCT ACACCCAAAT GGTACTTGAA 
CGAGTATGGT AGATTCGTCT CCGACGGAGA CGCTGCGGCC ATTCACTGTC AAAAACCACG 
AAAATCAGTA CTCCCCCGAT TGAGTACTCG GCAGCCGTTC GGACTTCGTG ACCAGAACCA 
TGGAACGGCC CGTAAGACGA AAAATGAAAA ATCCGAGGGA GAACACATTG ATATACAACG 
CCTCGTCAAG AGCACTATAT CTCTACCGGC GTCGAAGCCC ATTAAAGGCG GAGGCATGTC 
TCCTACTTTC AGAATTTTTG ACGACTCCAA AAAAGCTACG CCATGTGAGT CCTTGGAAAA 
ACCTACACCA AAAACGAACG CAGAGGAAGA ACTTATTTCT CGAACTCGCG CCCTGTCAAT 
TCAAACTTCC TCTCGCCTTC AAGATTCGGG CCGATGCAGT CCTGCAAGAT CTCTGGCATC 
CTCCACCTAC ACCGCAATTA TCGATTCCGG TACAGAGATT CTGCAGAAAC TCGTTGTCCA 
TCTAGAAGCC GTTCTAGAGT TAACTGCCTC ACGTCGTGAT GCGTTTCGAC CTACATCCCC 
TCAATCCGTA GTCGTGTATG CAGGACCTAC CAGATGGGTG AGCCGCTATG TTGATTATAC 
AAGCAAGTAT GGTCTGGGCT TTCTTTTGAA CGATGGTAGC TCCGGAGTTT ACTTTAATGA 
CTCAACCAAG ACTGCTCTGG AGGCACAGGG GGAGACATTC TACTATATTG AACGTAGAAA 
GGTTGAAGAC GCTGCTTCTC GAAAAGTAGA AATTGCTGTT GAAACCCACA CGTTGAGTTC 
GTACCCAGAG CACTTGAAGA AAAAAGTCAC TCTTCTGAAG CATTTCCGCA ATTATCTCTT 
AGACCAGCAG AATAAGGATG AAGAAACAGA GCCCACCCGG CCTCTTTCAT GCCTGCCAGT 
TTCTGACACA GTACACGTCA AGAAATGGAT TCGCACGAAA CACGCGATAC TGTTCCGTTT 
GAGTGACCAG ACCATCCAGG TAGTCTTCTA TGATCAAACA GAAGTACTCT TGACACCTGA 
TGTACGATAT ATTACCTATG TGGATAAAAA TCATGTCCGT CGAACATACG ACTTCACAGA 
CGAACTAGTT GGGTCCCTTG TGGAATTGGA GAAACGTCTG AAGTACACTA AAGAAGTTTT 
GTTGCAGCTC ATTGGTTCAC ACTCTGGACG TCGCTAA 

 

Protein sequence

DGHTIHQYLR GRFLGKGGFA KVYLCTALDT SKQYAVKIVP KANLVKARAR HKLQTEIKIH 
RTLKHPNICE YKHFFEDRNN CYILLELCHN QTLNEMIKRR KRLTEPEAAL FMNHLLDAVK 
YMHLKNVIHR DLKLGNLFLD RHLNVKVGDL GLATILEHPE EKRKTICGTP NYIAPEIIQG 
DKATRGYSFE VDVWSMGVIL FTILVGKPPY EAKDVKATYQ RILANEYSFP NNVELSLDAK 
DLIRSMLRST PCERLSLKEI GSHRFLSIRN TPLNIPSNAT HSTPKWYLNE YEEELISRTR 
ALSIQTSSRL QDSGRCSPAR SLASSTYTAI IDSGTEILQK LVVHLEAVLE LTASRRDAFR 
PTSPQSVVVY AGPTRWVSRY VDYTSKYGLG FLLNDGSSGV YFNDSTKTAL EAQGETFYYI 
ERRKVEDAAS RKVEIAVETH TLSSYPEHLK KKVTLLKHFR NYLLDQQNKD EETEPTRPLS 
CLPVSDTVHV KKWIRTKHAI LFRLSDQTIQ VVFYDQTEVL LTPDVRYITY VDKNHVRRTY 
DFTDELVGSL VELEKRLKYT KEVLLQLIGS HSGRR