| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_9816 |
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| Symbol | CPNE1b |
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| ID | 7197484 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | + |
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| Start bp | 982479 |
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| End bp | 983942 |
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| Gene Length | 1464 bp |
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| Protein Length | 469 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | copine 1 |
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| Protein accession | XP_002177730 |
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| Protein GI | 219111957 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000817776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCGGACGTGT TAGGAAAGAC CGAAGTCGTC AAGAATACGC TCAATCCGCA ATGGACCAAG
GTTTTTGTTT TCGACTACGA ACTCGGTACA CCCATGAAAG TCGCCGTTAG CATCTTTGAC
GAAGTCCGTA AGGGTGACAA CAAGTCCATG GGAAGCGCGA TGTTTGATAT TGGTGAGCTT
CTCGGAGCAC GGGGTAACAC AAAAGCCAAA CGGCTCAAAG GCGGAGGGAC TCTTTTTGCG
CACTTGCGAA AAAGCGAAGG GTCAGGATTG CTACGACTCA AAATGAAAGG TATCAAGCTC
AAGAACGTTG AAGGAATGTT TTCAAAGTCT GATCCTTTTT TCGAATTATC ACGGTGTATC
AACAGTGCTG GTGGCGACAC ATGGGACAAT GTCTACCGCT CCCAGCCGAT CAAAAACAAC
CTTTCCCCGG ACTGGGAAGA ATCGACTTTA CCACTGAGCA CTCTCTGCGG AGGAAACAAG
GATCTCCCGA TTCAAGTCTC TGTATATGAT TTTGAGGGTA GCGGCAAACA CACGATCATG
GGAATTTTTG AAACGACTGT GAACGGCCTT GTGAATGCTT CGACAAACGG CGCAGAGGAT
GTGGGCAAAG CTTTCAATCT ACAAAAGAAA GGAAAAGATT GCGGTAGTGT TGTTATTCTC
AAAGCCGAGG TAGCAGGGGA AGAGGTAGCT GAAAGAATGG CGCAAGTTTC GGTGTCGGAA
ACGAAGCCGT CAGTTTTCGT ACCAGGAACA CCCTCGTTTG TGGATTACAT CAGTGGAGGC
TGCGAACTTA ATGTTGTTGT CGCTATTGAT TTCACAGGAT CGAATGGCGA CCCGCGTAAA
CCTGGTACCC TCCACTACCG TCATCCAGAC GGTTCCCACA ACGATTACGA AAAGGCAATT
GCTTCCATCG TCAATATTCT GGCAAAGTAC GATTCCGACC AAAAGTTCCC TGTCGTCGGC
TTTGGTGCCA AGTACAATGG TGTGGTACGT CATTGTTTCC AGTGTGGACC AAGCCCTGAG
GTTCACGGGG TACAGGGAGT TTTGGATGCA TATCATTCCG TTTTCCAATC AGGACTCATT
ATGAGCAGCC CGACTACGTT TGTCGAAGCA ATTGAGACAG CTGCCTCTCG GGCTAACGTC
ACTCAGGAAG CTGCGAAACG CGACGGAAAG CAGGCTTACA CAATTTTGCT CATCTTGTCC
GATGGTGCTG TGACAGATGT CCCGTCGACG AAACAATGTT TGGAACGAGT CAGTGATTCT
CCTTTGTCAG TTGTGATTGT TGGTGTCGGT AGCGCGGATT TTACGTCCAT GGAGTTTTTG
GATGATTCCT CAGGAAAGCG CGATATTGCG CAGTTTGTCC AGTATAACAA GCATTCCTCC
AGTCCGGTGG ACCTGACGTC CGTTACACTG AAAGAAATTC CCGACCAGGT GGTTGGGTAT
TTCCAAAGCA AGTGCGTTTC ACCC
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| Protein sequence | PDVLGKTEVV KNTLNPQWTK VFVFDYELGT PMKVAVSIFD EVRKGDNKSM GSAMFDIGEL
LGARGNTKAK RLKGGGTLFA HLRKSEGSGL LRLKMKGIKL KNVEGMFSKS DPFFELSRCI
NSAGGDTWDN VYRSQPIKNN LSPDWEESTL PLSTLCGGNK DLPIQVSVYD FEGSGKHTIM
GIFETTVNGL VNASTNGAED VGKAFNLQKK GKDCGSVVIL KAEPSVFVPG TPSFVDYISG
GCELNVVVAI DFTGSNGDPR KPGTLHYRHP DGSHNDYEKA IASIVNILAK YDSDQKFPVV
GFGAKYNGVV RHCFQCGPSP EVHGVQGVLD AYHSVFQSGL IMSSPTTFVE AIETAASRAN
VTQEAAKRDG KQAYTILLIL SDGAVTDVPS TKQCLERVSD SPLSVVIVGV GSADFTSMEF
LDDSSGKRDI AQFVQYNKHS SSPVDLTSVT LKEIPDQVVG YFQSKCVSP
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