Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_9478 |
Symbol | |
ID | 7196491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 1270466 |
End bp | 1271146 |
Gene Length | 681 bp |
Protein Length | 227 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177254 |
Protein GI | 219111005 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ACGAGGCAAA GCTTCTACCG CAGGCCTTTG CCAGATTCTT GCACTGCCTT CTCCTCTAAA AATGGACGCT TAATCTTCAG CTCAGCGTTG GCTTCGAAAG GCCTCAAATC TTTTTTCCCG CTAATGGAGC AATACTCGAC ACAATCGGAA CCCGCTTACT GCGGTATAAG CACCCTTGTC ATCGCTTTGA ATGCCTTCGC GATTGACCCC CGGCAGACAT GGAAGGGACC ATGGAGGTGG TATGAGGAAT CGATGCTCAA CTGCTGCTTG GATCTAGAAG AAGCAAAACA GAAAGGTGTG ACACTAAAGG CTTTTTCGTG CCTTGCCGTC TGCCAGGGTA TTCAAGCGTC AGTTTACTAT ACCGAGGAAG AAAGAGTGTC CGAGAACCAT TTTCGGGAGA CTATTAAAGC TGCTTGCGTT GAATCAGAAG GTGATGGAGA CGGTCTTCGG GACGTTGTTG TAGTATCGTA TACTCGCAAA ACACTTGGGC AAACTGGAAC TGGGCATTTT TCTCCTATCG CTGCATTCGA CAGCGTTTCC GACTCAGTTT TGATTTTGGA TACTGCTCGG TTCAAATACG GAGCGCATTG GGTTCCTTTG TCTTTATTAT ACGAAGCTAT GCAACCTGTG GACCCCGATA CTGGTCGCTC TAGAGGTTAC GTTTTGCTAT CAAACGAAAA A
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Protein sequence | TRQSFYRRPL PDSCTAFSSK NGRLIFSSAL ASKGLKSFFP LMEQYSTQSE PAYCGISTLV IALNAFAIDP RQTWKGPWRW YEESMLNCCL DLEEAKQKGV TLKAFSCLAV CQGIQASVYY TEEERVSENH FRETIKAACV ESEGDGDGLR DVVVVSYTRK TLGQTGTGHF SPIAAFDSVS DSVLILDTAR FKYGAHWVPL SLLYEAMQPV DPDTGRSRGY VLLSNEK
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