Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_9386 |
Symbol | |
ID | 7196697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 330283 |
End bp | 331293 |
Gene Length | 1011 bp |
Protein Length | 337 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177071 |
Protein GI | 219110639 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTCTGC GTTACGCGGG GCCGGTGATT TTGTTGGACA CTGGACGCAA AGTTCGTTTG GGTCGACAGA TTGCCGAGGG AGGATTCAGT TTTGTGTTTG AAGCCACGGA CGCGCAAGAC ACGAGTAGCC CAGACGTAGT CCACCGCTAC GCACTCAAGC GCATTCGTTG TGGCGATACC GAAATCCTGG AATCCTGTCG ACATGAAGCT CGGGTACATC GAGCAATCCG TCATCCCAAC GTCATGCCCT TGTTGGGCAT GGCGATTACG GTGGATCGCC AGAATCGCGA TGCTTCGCTC TGTTACATGC TCTTTCCATA CTACCCCTGG TCTTTGCGCC AGCAAGTCAA TCAACGTGTC TTTCATTCCA AAAGTCGTCG ACCTGACGTA GCACCTTGGA AGGAACTTGA CGTACTCGAG ATAGTTTACG GCATTGTACG CGGAACTAGG GCTCTCCACG AAGCTGGATT TTCGCACCGG GATATCAAAC CGGAGAATGT ACTATTGCCG GAAAACCGTA CGTCGCGATC CTTTTCGTCA AAGGAGAACA CGTGGCAACC AGTATTGATG GATTTCGGAT CCGCCGGTCC GTTGCGACAA TCATTGCGGA ATCGGAACGA TGTATTGATG CTGGCCGAGA ATGCATCTAT GCACACGACA ATGCCGTATC GTCCACCGGA GCTTTTGGAA GGAGCGGTTC GTGTCGGGGA TGAGGACATT GACTTTGCGG CAGTGGACGT ATGGAGCGTG GGATGCACGC TCTTTGCCAT TCTGTTTGGC GCGTCACCGT TGGAATCCGA GTTCAACCAA AGGGACGGGT CCCTCCGTGT GGTGGACTGT ACGCAACTTT CTATTCTAAA GCCGGTACCG ATGCCACCTT TGCAACTGAG TTGTGGGTCC TGGTATTCCG CGGACATACT GACACTGGTG GTGGACATGC TGGTGCAAGA TCGTCACGCT CGACCAACTC TAGCAACCGT GACATCCCGG CTTGAGCAGT TGATTGAAAG C
|
Protein sequence | MFLRYAGPVI LLDTGRKVRL GRQIAEGGFS FVFEATDAQD TSSPDVVHRY ALKRIRCGDT EILESCRHEA RVHRAIRHPN VMPLLGMAIT VDRQNRDASL CYMLFPYYPW SLRQQVNQRV FHSKSRRPDV APWKELDVLE IVYGIVRGTR ALHEAGFSHR DIKPENVLLP ENRTSRSFSS KENTWQPVLM DFGSAGPLRQ SLRNRNDVLM LAENASMHTT MPYRPPELLE GAVRVGDEDI DFAAVDVWSV GCTLFAILFG ASPLESEFNQ RDGSLRVVDC TQLSILKPVP MPPLQLSCGS WYSADILTLV VDMLVQDRHA RPTLATVTSR LEQLIES
|
| |