| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_8683 |
|---|
| Symbol | |
|---|
| ID | 7196058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | + |
|---|
| Start bp | 241698 |
|---|
| End bp | 242192 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002176551 |
|---|
| Protein GI | 219109593 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.437829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GAGGTGGCAA CGTTTGCTCT AGGATGTTTC TGGGGTGCAG AATTGGCCTT CCTTCGCGTC
CAAGGCGTTG TCGGGACCAA AGTCGGTTAT TCGCAAGGGA TTACTCGCGA TCCAACCTAC
GAAAAAGTAT GTTCCGGTGG CACTCAACAT CGCGAAGCGG TCATGGTGGT CTACGACGCT
AACGTCGTTT CGTACGCAAC CTTACTGGGC GTGGCGATGG AAAGACTCGC CGTCACGACG
TCGTCCTACG ATACCTATCG CATGTTTGAA CAGGACGAGG ACAGTCGGCA GTACAAACAC
GGAGTCTACT ATCACAACCC CGAGCAGCAA CGTCTCGCTC ACGAGTTTTC GGAATCCAGC
AACAACCGAT TCGGCATCGA GCTCCTGATG GCTTCCACTT TTTACGACGC GGAAGAAGAT
CACCAAAAGT ATCTTTACAA GGGTGGCCAG AGCGCGCGCA AGGGAGCCAA GGAAACCATC
CGGTGTTTCG GGTGA
|
|---|
| Protein sequence | EVATFALGCF WGAELAFLRV QGVVGTKVGY SQGITRDPTY EKVCSGGTQH REAVMVVYDA
NVVSYATLLG VAMERLAVTT SSYDTYRMFE QDEDSRQYKH GVYYHNPEQQ RLAHEFSESS
NNRFGIELLM ASTFYDAEED HQKYLYKGGQ SARKGAKETI RCFG
|
|---|
| |