| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_56510 |
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| Symbol | |
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| ID | 7200536 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011675 |
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| Strand | + |
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| Start bp | 100281 |
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| End bp | 102830 |
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| Gene Length | 2550 bp |
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| Protein Length | 664 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179580 |
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| Protein GI | 219117574 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTGGA CTCCTTTGTT GTTGATCCGT TCAGTAACCT TTCTTTCGAA AGCGTTGGTA
GAATCCGTAT AGATTGAATC GCCTAAAGTT CTACAGAAAA TGTCAAACAA TAGGTAGCGA
GCTATAGATA GTTTGCTCAT ATGGTTTTGT TCTCATGTGC GGGAAGTGTC ATCGTCATGC
TTTTCGTAGA GGCTGCCTAA CATAAATATA TTAGACTACT ACTGTCTTGG CTTTGCGATC
CAAGCAGAGA GAGTTGCATC AATTGTGGAG CTGGTACAAC ACACATTGAT TGTGAGAATA
TACCGTTAGA AAATGGGGAA ACTCCGATAT TGGATGTTTA CTGTCGGATG CGTGTGCGTC
ACTGTATAGG ACTAGAACCG CAATTCTTTG AGTCGTGTTG ATACAGCAAT ATGTGATTGG
TCGATAATAC CACGTTGCAC GTCGACACGG TTCGTTTTGC AAGTACGGCA TCGTGAATCG
ACCCCCACTA TTGTTAGAAG GGTGGCAAGC GTTTCTCGTT TTCTCGGGGC ACTTCCGGAA
TGCGGGCAAC CCGAAAGAAC AATCAGTCCA GCCAGGGACA CTTCTCTCCA ATGCTCGCTC
GTTCATTTCC GGAAGAACTA GAGAGAGTAT ACCTTTGTCC AAGAAAGTCA CTTCATTTCC
GCAATAATGA ACGATCGGGT GACGGCACAC GCAAGCAGCA GTGGCACCAT ACCCAAAAGG
ACACACAAGA AGCAGCAAGC TCCGACTAAC GTGGACCCCA AAAAGTGGAT TCGAGGCGTT
AATCTCGGAG GCTGGTTGGT GTTGGAACGT TACATTACCC CCTATCAGTT TGCCATTACT
TCATGCCACA TACAAGGCGA CTTGTGCTGG TACGAAGGAC AGCTCAGCGC ACCGCCAACG
GATCATCCAG ACTACAAGCT ATGTCCCGCT ATCAACGCTA TTCCGAAAAC CAACAACACA
GAAACAACAA TAGAAAGAGA GACTTGCGAG CCCATCCTCT CTACCAGTGT CTTTGATGAA
TTGGACTATC CTATCGATGA ATGGACACTG GCCCAGGCTT TTACAGATCG CAGCATCGGC
GAGAAATGGT TAAACTTTCA CTTTGACAAT TTCATTTCAA GATCGGACTT GGTGGCTCTC
CGGAACGCCG GTCTCTCACA TTTGCGCGTT CCCTTGCCAC ACTGGATTCT CCAACAACGC
CAGGATCCCA GAAGTGCAAG CTCGAATCAT ACCGATTGGG ACGTAGACGA AGACGTTTGG
ATTGCGGGAG ATCGATGGAA GTACTTTGTC CGCATGTGCG GTTGGGCCAG AGAGCTGGGT
CTAGAAGTCT GGCCGGACAT ACACACTGCG CCCGGTTCCC AGAACGGTTT TGATAATTCT
GGGGTTCAAA AGGTAGAGCA CTCTTGTCAA CCTTGGAGTT CTAATCCAGC GCATGTCGAA
CGATCGCTTC GATCCATTCG CGACGTCGTC CGTGGTGTTG TGGAGGAGGG TTTGAGTGAC
GTTGTCACAG GTTTTGGTCT GCTCAACGAA CCCTTCTTGG ATTGCGATTT TGACGTGTAC
AAAAAATTTA TGGAGGATGG CTTGGACATT GTCCGAGATG GGCTCGGAAA GGAGACAGCG
GTGTTCGTTC ACGATCAGTT CAGCGCCTCT AAATACAATG ACGGATCCTG GTGGCTACCA
CAACAAGGCA GCAATTTAGA GAGCGAGGGG CTACAACATC AGCGATACCA GAACACTTAC
TTGGATAGTC ATTACTATCA AGTATTTGCT GAACAGTTTC GCGCGCTAAG CCCCCGCCAG
CATATTGCCT TTACCTGCCA AGGAGAAACT CACAAAGATG GAGCGGCATC GTGCTGCTAC
TCGGATCCTC CTCACAATCG CCAGCCTAGT TTGTCTCAGG GAAAGGGTGT GCAGCGACTT
GTCAGCGAGT GGAGCTGTGC AACCGATACT CTTGTGGTGG ACATGTTGCG GTTGGTGATG
AAAGCGATTC GCCGGAATGG AACAGCAGCA TTTTCGGATC GAATCATTTC ACCGGAACGC
ATGGCCTTCC TGAACAATTT TGCACAAGCA CAGATGGTCG TTTACGAAAC TGCTAATGTG
GGAGTGTCAG GTGGATGGTT CTATTGGACT GCAAAAATGG AGGGTGGTGC ATTTGCCGAG
TGGGACTTTT TACGTGGCGT TCGCGAAGGA TGGATTCCAA AGCTACCAAG CAAGGAAAAT
TCCAGTCAAG CCGTTTTTGG CACCTGTCAA GAAATAATCT TTCGTACCGA TGACGATATG
GATATTATAC ATGAGTATCC ACCGCGCGAA GAAGATCCGC CGGCGTGGCA GCTGGATGAC
GATGTGGTGA TATCCCATGG CGAGTCATTG CTTGAAAACG GCCCTTGGCA TGCGATAGCT
CGGATCCATT TCCACTGGAT TGCAGTGGCG ATTGTTGCTT GTAGCGCTCT TGTTGTGTTA
CGGTTGTGCG TTAAACGCGG GAAGCGCCAC AGCTACGAAA AGATTGACTC CAATGGTTTT
TCACTGCACA AGACAAGAGA AGAATTGTGA
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| Protein sequence | MHWTPLLLIR SVTFLSKALV ESREYTFVQE SHFISAIMND RVTAHASSSG TIPKRTHKKQ
QAPTNVDPKK WIRGVNLGGW LVLERYITPY QFAITSCHIQ GDLCWYEGQL SAPPTDHPDY
KLCPAINAIP KTNNTETTIE RETCEPILST SVFDELDYPI DEWTLAQAFT DRSIGEKWLN
FHFDNFISRS DLVALRNAGL SHLRVPLPHW ILQQRQDPRS ASSNHTDWDV DEDVWIAGDR
WKYFVRMCGW ARELGLEVWP DIHTAPGSQN GFDNSGVQKV EHSCQPWSSN PAHVERSLRS
IRDVVRGVVE EGLSDVVTGF GLLNEPFLDC DFDVYKKFME DGLDIVRDGL GKETAVFVHD
QFSASKYNDG SWWLPQQGSN LESEGLQHQR YQNTYLDSHY YQVFAEQFRA LSPRQHIAFT
CQGETHKDGA ASCCYSDPPH NRQPSLSQGK GVQRLVSEWS CATDTLVVDM LRLVMKAIRR
NGTAAFSDRI ISPERMAFLN NFAQAQMVVY ETANVGVSGG WFYWTAKMEG GAFAEWDFLR
GVREGWIPKL PSKENSSQAV FGTCQEIIFR TDDDMDIIHE YPPREEDPPA WQLDDDVVIS
HGESLLENGP WHAIARIHFH WIAVAIVACS ALVVLRLCVK RGKRHSYEKI DSNGFSLHKT
REEL
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