5 homologs were found in PanDaTox collection
for query gene PHATRDRAFT_55482 on replicon NC_011672
Organism: Phaeodactylum tricornutum CCAP 1055/1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011672  PHATRDRAFT_55482  det3-like protein  100 
 
 
443 aa  915    Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0187652  n/a   
 
 
-
 
NC_009361  OSTLU_87859  F-ATPase family transporter: protons (vacuolar)  30.52 
 
 
374 aa  156  7e-37  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal  0.350431 
 
 
-
 
NC_009044  PICST_58102  Vacuolar ATP synthase subunit C (V-ATPase C subunit) (Vacuolar proton pump C subunit) (V-ATPase 42 kDa subunit)  24.34 
 
 
373 aa  133  6.999999999999999e-30  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal  0.143642 
 
 
-
 
BN001308  ANIA_01195  vacuolar ATP synthase subunit c (AFU_orthologue; AFUA_1G10810)  27.84 
 
 
390 aa  127  3e-28  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_006685  CNC06660  conserved hypothetical protein  28.16 
 
 
396 aa  122  9.999999999999999e-27  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  decreased coverage  0.000684608  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>