| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_55482 |
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| Symbol | |
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| ID | 7198034 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | - |
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| Start bp | 286825 |
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| End bp | 288250 |
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| Gene Length | 1426 bp |
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| Protein Length | 443 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | det3-like protein |
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| Protein accession | XP_002178470 |
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| Protein GI | 219115349 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0187652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTATT ACATAACAGC AATCTCCAAT TCGGGCGGTG CTCCCGAACA GGCTTACCGC
AAGATGCAGT CGGCGGGTGC GTGTCCCGAA CGAGCCTTTG CTGGTACGTG TGGAATAAGA
TACGAAAGAT CCATTCCTTC GTGGTGGAGT GTACGAAACA TCATGACACG TTCCGCATGC
TTGCAAAGTG TTCCTTGCTA ACAAAAATCT GATTCTCTTT ATTTAGAAAT GTTCAAGTTT
GAAGTGCCTT CGCTTACGGT CGGAACTTTG GATACGCTCA TGAACTTGAG CGATGAGCTA
GGAAAGACGG ACAATATCAT CGAGGGAATT GTACGCAAAA TTGAGAAGAC GTCGGGAGAT
CTTGCCGATC GTCGCACGGT AGATCTGAGC GTAGGGGGTG TTCCTCCAGC CCGTTACATC
CAGCAGTTCG CCTGGGATTC GGCCAAGTAT CCCAATCGGC GACCATTGAA AGAATTGGTG
TCGGTGATTT CGGGCGGTGC GGTGGCAATT GATGAAGAGC TGAAGCAGCT CACGCAGTCG
TACGGAGACA AGACGGTTGC GTTGCAGGAA ATGAAGCGTC GTAAGGGCGG GAATCTTCTG
TCCGCCGAGT TGAATGACGT CTTGACGGAG GATATAATGC GCAAGATCAA CGTGGTCGAT
ACGGATTACC TCAAATCGAT ATTTATCGCC GTAGCGAAGT CCGCGCAGGA AGTGTTCGAA
GGGAGCATTT ACAGTCTTGC TGATAATGTC GTTGGATACG GCGGACCGGA TTGGTCCAGC
GACCCAACCA AGCTCGGCGA ACCAGTATCT TATGGGTCGA ACGTTGATCG CCACAAGATT
CGCGGATCGC CGGTGGTTCC TGGATCTCTA CAGAGAGTGC ATTCCGATGA CGACAGTATA
CTTTACGTGG TGACAATCTT AAAGAGCCAG TACGAAGCAG GTTACTACGA AAACGATGAG
TTTCAGCCCG GCACCCAGGT CGACTTTGAA GAAGAGTTTG CCAAGTCGTG CCGCGAGAAG
CGTTTTATCG TTCGCGATTT CAGCTGGGAT CCGTCGCAAT CATCCAAGGC TTCCATGGCA
CTGGAACAGC TTCGTGTTGA AGTGGATGGA ATGAAAAGCG CCCTCATGCG ATGGTGCAAG
AATCACTACG GCGACGCTTT CGTCGCCTGG ATGCACATCA AGGTCATTCG AGTCTTTGTG
GAATCTGTCC TACGCTACGG CCTTCCCGTG GATTTTACGG CCGTGTTGTA CAAGGTACAC
CAGGGTAAAG AAAACGACTT GGTTGGGGCC CTGGATAAGG AACTTGGAAG CACCGGCGAT
ATCAAGGAAA TGGATGACGA TGGCGACGAA GATTACCATG ATTTTGTTCT GTTGAAGTTT
GACCCGTAAT TAAGTTTGTG TAAAAGGCAC ACAGTATTCT CAGGTG
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| Protein sequence | MSYYITAISN SGGAPEQAYR KMQSAGACPE RAFAGTCGIR YERSIPSWWS VRNIMTQMFK
FEVPSLTVGT LDTLMNLSDE LGKTDNIIEG IVRKIEKTSG DLADRRTVDL SVGGVPPARY
IQQFAWDSAK YPNRRPLKEL VSVISGGAVA IDEELKQLTQ SYGDKTVALQ EMKRRKGGNL
LSAELNDVLT EDIMRKINVV DTDYLKSIFI AVAKSAQEVF EGSIYSLADN VVGYGGPDWS
SDPTKLGEPV SYGSNVDRHK IRGSPVVPGS LQRVHSDDDS ILYVVTILKS QYEAGYYEND
EFQPGTQVDF EEEFAKSCRE KRFIVRDFSW DPSQSSKASM ALEQLRVEVD GMKSALMRWC
KNHYGDAFVA WMHIKVIRVF VESVLRYGLP VDFTAVLYKV HQGKENDLVG ALDKELGSTG
DIKEMDDDGD EDYHDFVLLK FDP
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