Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_55416 |
Symbol | |
ID | 7197280 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | - |
Start bp | 1420922 |
End bp | 1422023 |
Gene Length | 1102 bp |
Protein Length | 263 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178140 |
Protein GI | 219112777 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GATGATTTCC TTAATCTTTT TTGCAACGAC AAAGTGAAAT CCCCTGCCTT TTGCAAGCAT TACAAAACGC TCGATTCTCT AGTACCTCGT ATCCTTCGTT TTGAACCTGT TCCAACAATG CGACAACACA TAGTTTTCGG TTGGCTGGCC TTGACGGGGG CAGAAATTGG AGCCTTCGCA CCGGCCTTTT CGGTGAGCAG GCAAACGTCG CGACGACAAC AGGTTTTCCA ACCGCGGTTG CATGCGGCGT CGGCGGACTC TACCGCGACG ACCGGATCAT TCATTGACAC GGAGTTGCGA GGCGCTGCCA TGAAGCTTCA TACTCGGCAG CAAGCACCAA AAGAAGGAGA AGCGGAAGCG AAACCACGTG AACCCTATAC CCCGACTCGT GACGACTACT TGGCCTTTCT AGTGGACTCG AAACACGTAT ACGAGGCTAT GGAGGAGATT GTAAATTCAC GCGAAGAGCT GGCCCCGTTT CGAAATACTG GATTGGAACG AACGGGTCCT TTAGAAGCTG ATATTCTGTT TATGGTAGAA GAATACGGCT TGAAACGACC TATTGTGGGG GAGCCTAGTG AAAGCTACGC TAGGAAACTT CGATCCATTG AGACCACTCC GGAATTCATG TGCCACTTTT ACAATTTTTA CTTCGCACAC ACAGCCGGCG GGAGAATGAT TGGCAAACAG ATGAGTGCGC TACTGTTGGA GAAAAGAACA CTAGAGTTTT ACAAGGTACG TTTACCATCG ACGAGAAAGT AAAAGCGGAG CCCCTTTAAT GCTCACATGC GAACCTTCCT TGCTTAGTGG GACGGGGATC TAAACGAGAT TAAATCGCGT GTGAAGAAGA GCATCGAAGA AATGGCCGCA AACTGGTCGC AGGAGGAACG GCAAGAGTGC ATCGATGCCA CTCGCGATGC CTTCCAAGGA GGAGGAGGAA TCAACTCTAA CTTGGCTGGT GGTCAGCATC CCCACAATTA AAAAGTTGCG CATTGAATTT TCTTACAGTC AATACATTGG CACGAAACTC TTGTATTTTT TCATTGAGGC ATGTGCACTT TCAATATGTA GGTTTGCTAA TGTAATTTTG CCTATATGCG AT
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Protein sequence | MRQHIVFGWL ALTGAEIGAF APAFSVSRQT SRRQQVFQPR LHAASADSTA TTGSFIDTEL RGAAMKLHTR QQAPKEGEAE AKPREPYTPT RDDYLAFLVD SKHVYEAMEE IVNSREELAP FRNTGLERTG PLEADILFMV EEYGLKRPIV GEPSESYARK LRSIETTPEF MCHFYNFYFA HTAGGRMIGK QMSALLLEKR TLEFYKWDGD LNEIKSRVKK SIEEMAANWS QEERQECIDA TRDAFQGGGG INSNLAGGQH PHN
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