Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_54749 |
Symbol | |
ID | 7202602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011681 |
Strand | - |
Start bp | 802419 |
End bp | 804622 |
Gene Length | 2204 bp |
Protein Length | 734 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181807 |
Protein GI | 219122968 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.104715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTTTT GTAGAATGAA TGCAAGGAGA GGGCACCTAC TGTTTATATT TCGCGTTTTC GTGGTAGGCG TGAAAACCAG CTTGCTCAGA CTCATAGACG CTTGCTCCGT GTGTCCCGAC AGCAGAAATT TCACCCTACC CGAAAAAGCT ATAAGCATTC CCGGCTTGGA AAGTATTACG ACTTGTCAGC AGCTAGGATC TACCGTATCG ATTCTCCTGT CTGACAACGA TCCTTTGTGC AAAACAGTAC AGTCACTTGG CACTTTTTGC GGATGCCCGA AGGCAGAAAC AGCGTGTGAG ATTTGTCAAA GCGGCCAGAG ACTTAGCCGA CCTGCCCGAG AATTGTTTTT TCTCTCTCTA GAAGGCATCA TGCCATCGTG CGAGCTTTTC GAAGCGTACC TGCACAGTCT GGCCAGCGAC GATGAAGTAT GTATCGCGTC TATCTTTTTG CTTGCAGATT ATTGTGGCTG TACGTCAGAA GCGGATGATA TATTGTCAGG AGACGACATG TCTAGCATTG GCGGCTGCTC CCTATGTCAA AATATGGACG ACTTAGAAAT GGAAACTGAA GTTTATTTTC CTGGGTTTCC GCTGAACACT TGCGGCCAGT TCGCTAGCAC AGCAAACGCT GTCTCATCAC CAGAAGCAGA CACATGTCTT TATCTTCAAG CTTCCATAGG CACACTTTGT GGGTGTTCTG TGAGAAACCC AGCGACGCAG CCCTGCACTC TGTGCAGTGA TAGATCAGCC CCATCACGTC CATCTCAAAT GTTGCCGTTG CTGTCGAGCC AATTCGCCGG GTTGACGCCT ACCTGTGAAA TCCTGGAAGC ATCATTGCTA TCCGTTGAAT TGAGCTCAGA CGAGTGCAAA GTCGGACATT TGCTTGGAGG TGTCTGCGGT TGCGCACCGG TTGAGGATCA TTGTGTTTTC TGTCCTGAAG GAGATCCGAT ACCTGAATAT CTGCGAGAGC GCGAACTTCC ACAATTCGCT AGGTTTCTGG ATGGGCTAAT TGCAACCTGT GCAGATATTG AACAAGCTCA AACACAAATA CCCACGGAAT CGTTAATCTG CAGCAGAGGC AAGCATCGCA AAGATCTATG TTGCGGGGGA CACTTTCAGT ATTTAGGAAC GTCGACAGTC CGAAAGCAGG CTGTTTTGGC CTGGCTGCCT CGGGGCGTCG CTCTTCTTTC GATTTTGGGA TCTACTTACG TTCTCTCAAA TATTGTCCGC CACAAGGAAC GTCGCGCAAC GATTTTCCAT CGCATAATGA TTGGTCTGAC CGTATCTGAT ATAGTGAGTG CAGTGGCTTG GGGTTTCACA ACTTTGCCTG TACCGGCAAA CGATGATTTC GGTGCCCCTT CGAAGATTTA CGGCGCAAGA GGGAATGGCG TGACTTGTGC AATTCAGGGC TTTTTTATTC AATTGGGCTT CACGTCGATC TTTTTCAATG TAGCACTGAC AACCTACTAC GTCCTAGTTA TTGTCTACAA CTGGAGAGAA ACGCGACTGA TCAAGCTGCA GTATTGGTTC TATACAATAC CCGTTCTTTT GGGCTCCACT TTGGCTTTCG CTGGAATACC GTTTTATACG AACAACATTA TGGCTTGCTA CGTTAACGCA CCTCCTTTGG CGGAGAAATA CACTGTCATC GCTTTGCTGG CCGTGGTGCC TGTGTGCTTT GTTGTCCTCT TTTGCACCAC AGCAATGGCG AGAGTTTATC TGCATGTACG TCACCAGCAA AAAAGGGCCA GTAATTGGAG AATGGGCGGG TCTGGAAAGT GTATTGAGCA GCAAGTACTA TGGCAATCGG TCTTTTACGT GGGGGCCTTT TACATTTCGT GGCCAATTCA AGTTGTTGGA ATCTTCATGT CCGAGCCACC GTTTCGAGAG CATACGCCTT ACGCATTTTG GCTTCTTATG GTGTCATTGG CACCAATCCA AGGCCTTTTG AACTTTTTCG TTTACATAAG GCCTCGCTTG TCCAAAAAAC GTGATTCCGC TGGCTCCTCA CCGGCGGATT CCGGCATTCA AGGATCGTCT TGGCTGTTGT CGACACGTTT CGCCAAGGTA CTCAGTATTT TTGAACGTCA ACGAGAAGCA AGAGACGAGA CGTCGTTATT GAATGAGCAA GTTTCTCACA AAAGGAATGA GGCAAATGAT TTGGACCCCA AGGATTTTCA AGAAGATCCC TTGTCAGGTT TTTG
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Protein sequence | MTFCRMNARR GHLLFIFRVF VVGVKTSLLR LIDACSVCPD SRNFTLPEKA ISIPGLESIT TCQQLGSTVS ILLSDNDPLC KTVQSLGTFC GCPKAETACE ICQSGQRLSR PARELFFLSL EGIMPSCELF EAYLHSLASD DEVCIASIFL LADYCGCTSE ADDILSGDDM SSIGGCSLCQ NMDDLEMETE VYFPGFPLNT CGQFASTANA VSSPEADTCL YLQASIGTLC GCSVRNPATQ PCTLCSDRSA PSRPSQMLPL LSSQFAGLTP TCEILEASLL SVELSSDECK VGHLLGGVCG CAPVEDHCVF CPEGDPIPEY LRERELPQFA RFLDGLIATC ADIEQAQTQI PTESLICSRG KHRKDLCCGG HFQYLGTSTV RKQAVLAWLP RGVALLSILG STYVLSNIVR HKERRATIFH RIMIGLTVSD IVSAVAWGFT TLPVPANDDF GAPSKIYGAR GNGVTCAIQG FFIQLGFTSI FFNVALTTYY VLVIVYNWRE TRLIKLQYWF YTIPVLLGST LAFAGIPFYT NNIMACYVNA PPLAEKYTVI ALLAVVPVCF VVLFCTTAMA RVYLHVRHQQ KRASNWRMGG SGKCIEQQVL WQSVFYVGAF YISWPIQVVG IFMSEPPFRE HTPYAFWLLM VSLAPIQGLL NFFVYIRPRL SKKRDSAGSS PADSGIQGSS WLLSTRFAKV LSIFERQREA RDETSLLNEQ VSHKRNEAND LDPKDFQEDP LSGF
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