Gene PHATRDRAFT_54743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_54743 
Symbol 
ID7202466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp627796 
End bp628842 
Gene Length1047 bp 
Protein Length347 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181601 
Protein GI219122540 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0297675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCTA CAACAACCTT CCATGGAAAA GAAGAATTCG ATTACAAAGG CTTATCATGG 
ATCAGTCCTC CGGCTGGTTT AGGGGCTCTG GTTGCCGATG GCCAGCTCGA AATTGATCAT
CACCGCTGTT TTGTGCCTAA AAAGTGTGTC CATCGCTTTA CAGGCCACAA CAAAGGTGTG
CACCGAATTC GCCTTTTCCC CCAGACTGGG CATTTGATTC TTAGTGCTGG TTTAGATGGG
AAGTGCAAGG TTTGGTCGGT TGAGCAAAAG CAAGTCATGC GAACATACAT TGGCCATTCT
GCCGCCGTGC GGGATGTACA ATTTAATCAT GATGGTACTC GTTTCATTTC TGCTTCATTT
GACCGATACC TCCGTCTCTG GGATACAGAA TCCGGCAAAG TTTTACAGAC ATTCACTAAC
AGAAAGGTAC CCTATGTGGT TCAGTTCTAT CCCCACGACG ACAATTTGTT CGTGGTTGGT
TGTAGTGACA ACAAGATTGT AACGTACGAT GCCACCACAG CCGAAGTTAC ACAAGAGTAC
AACCATCATT TGGCGCCAGT GAATTCAATC TTGTTTGTGG AGGATCATGG AACAAAGATG
GTGACCACCA GTGACGATAA GAAGGTACTC GTGTGGGAGT GGGATATCGG TGTTCCGATC
AAATACATAT CGGATCCATC TATGCAATCA ATTCCGTCTA CAACATTGCA CCCTTCACAT
CAGTACTTTT GTGGACAAAG TCTGGACAAC ACAATTGTTG TATTTCAAGC CAATAATCGC
TTCGCTCTTC AACGAAAAAA GAAGTTTTCG GGGCACGTGG TCTCTGGCTA TGCATGTGAG
ATTGCTTTCA GTCCAGATGG ACAGTTTCTT GTAAGCGGAG ACGGTAATGG AAGCGTGTTT
GTTTGGGACT GGAAAAAGCA CAAAATTTTG CAAAAATTTC GTGCGCATAG TAGCGGGCCT
GCAATATGCT GCGTATGGCA TCCCTTAGAA CCCACCACAC TGTTTACGTG TGGATGGGAC
GGTCTCATTA AAATGTGGCA GTAGTAG
 
Protein sequence
MDSTTTFHGK EEFDYKGLSW ISPPAGLGAL VADGQLEIDH HRCFVPKKCV HRFTGHNKGV 
HRIRLFPQTG HLILSAGLDG KCKVWSVEQK QVMRTYIGHS AAVRDVQFNH DGTRFISASF
DRYLRLWDTE SGKVLQTFTN RKVPYVVQFY PHDDNLFVVG CSDNKIVTYD ATTAEVTQEY
NHHLAPVNSI LFVEDHGTKM VTTSDDKKVL VWEWDIGVPI KYISDPSMQS IPSTTLHPSH
QYFCGQSLDN TIVVFQANNR FALQRKKKFS GHVVSGYACE IAFSPDGQFL VSGDGNGSVF
VWDWKKHKIL QKFRAHSSGP AICCVWHPLE PTTLFTCGWD GLIKMWQ