| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54612 |
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| Symbol | |
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| ID | 7201744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011678 |
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| Strand | + |
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| Start bp | 915143 |
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| End bp | 917464 |
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| Gene Length | 2322 bp |
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| Protein Length | 736 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | ercc4-like protein |
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| Protein accession | XP_002180922 |
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| Protein GI | 219120365 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACTTGTCCG TCCACAGATT GGACGTGCTC GGCAGTGGAT AGCGTTGACA ACGACCCACC
ATGGCGTACA CCAAGACGCA GACATTTGGT CGGACGACGA ACGGTAGTTC TACGTCCGCT
CACTGTAAAC CCGTCAAGGC CAAATGCGTA GACAACCAAA GCCTCGTCGA CGCACTCGTA
GCGAAACGAT CCACGCTCGG TAGCAACAAC TACTCGCGGA CGTTACGCAA AGCGACCGAA
AGTCTCGCCA AACAGAAAGA AGCCGTCCAA TCCTACGCCC AAGCCAAGGC ACTGAGCGGA
ATTGGAGATC ACGTCGCCAA TCTATTGTTT CCCGCCGCGA AGCTGAAATC CGCAGAGTCC
CCCGCTTCGT CAGTCGGGTC CACGAAATCA ACCGCTTCCC GATCACGTCC ACGGAATACA
TTGCCAACTG CCGATCCTGT GGAAAAACCA AGCGCGAGAG AGATTGCCTA CCAAAACGCA
GTGCAACACG CCACTGCTTG GAAATCGCTG TCGCTGACTT GGCGGGCGGT ACTTCTAATC
GACCAGCGGG AGACTCAATC GGACCACGTT ATTGCCAAGT GCCGAATGTC CGGTATTCCT
TGTGAAGCAC GATCGTTACC CATTGGGGAC ATGGCTTGGA TGGCTCAAGG AATGGACACT
GCAGGCAAAA TTAAAGCCGA ACTGATGCTG GGGACAATCG TCGAACGTAA AACGGTAGAC
GATTTGAAAG CATCCCTCTT TGGCACGCGT TACAATGAAC AGCAACTTCG ATTGATGCAT
TCCGGCTTGC CACAAGTTCT CTTTCTGATT GAAGGAGACT TGACCAAAGA TCTGCGTGGT
TGCAGTGTGG AAACAATGCA TACAGCGACC TGGGAAATTC GTTTACACAA GGACTTCCAA
ATTCTGCAAA CGGCTCATCT CGACGAAACC GTGCAAACAT TGAAACGCAT GCATCGACGA
GTGCTGCAAC GGTCTTTTCC CCGCGCATTC GTAACTCAGG CCCTGCCAAC TTTCTCCGAA
ACCGATACCT CTGTCAATGA CAAGCAAGCT AAGCGGCGAA GTACTGATCA GGCGGCGCCC
AGGAAGAATC GGCGACGTCG GTTGCAGTCG CTCATGGAGA TGATGTTTGA TGTCGATCCA
ACGCCCATGC CCGGTACGGA ACGTTTCATT ACTTACGCGG AGCTCAAAGC CAAAGTGGAA
TACGACAGAG AATTAGGAAC CCGTACAATC GGCTCTATTC ATAGTGCGAT GCTGAAGCAA
GTGCAAAGCT TTTCGGATCG CAAAGTCCAA GCCCTGTGCC GCACGTATTC GACAGCCAAC
GAACTATTTC TGGCCTACGA AAGTGTAAAT GATGTCGCTT CCAAGAAAGC GCTGGTCACC
GAACTTCCCA TTTCAGATCC TTCGTCTCAT CAACTCCGAA AGACTGGTCC CAAGAGTGCG
GAAGAGTTGT ACACTGTGTA CGGAATGGAC GAAGGAATCT CTCCACCGGC CTCGATATCG
AAAGACGGCA CTAAACCTTC CCTCACGGCG GCATGGATGC CATCTCCAAT ACAAGAGGAA
GACGATGAAG ATCTCTGGCC GAATGGAGAT CCAAATGTGA AAAAGTACGT GGAGAGCCAA
ATGCCGTTTA CTTCTATTGA TTCCCAACCG ATGGATATAC CTTTGGCGCG TTGTCTAATT
TCAAAATCAG CGGCGAGTGA GCAGCAGCCT CTGTCGGAGG TTAATATTGA CAAGGCGAGT
CGCTCAGAAG CACAGGACGA GGATCTGGGG GACGCTTTTA AAGGCATCGG AAGTTCAGCC
CCCATATCTT CTGTTTGCAA GCGGGGCGTT TCGAAGCCTC TTACGGCGCC AACAAAGGCA
GTCAACGTGG ACGACTATAT TGACTTGCTT TCCTCAGACA ACGACGAAGG AGGCGAAACA
GATACCGCTG AACCATTCGC CAAATGTGAG AAGGAGTTGG ACTGTCTGCA TTTTTCCGGC
GTCGTGGAAC AAAAAGCGGA ATTGGCAGAG TTCAATATTC GGTCTCCCGC ACCTGTGGTA
GTTAGTCAAT CTAGAGCCAG CTTTACTGCT CCATCAAGTT TGTTCAGCAG CGACGATGAC
GATGCCAGTG TGTTCCAACG GTCTCCGTTG CGAAGCAAAC GGAAACCTTT TTCCGCTGTT
GGTAACTCCT CATGTAAGAA AGCAAGGTTT GGGTGCGAAA CCGAGCAAAC AAGAACAAAG
AGATCCGCTG GCAATAAAGC TGCGTCTCCG GAAGTTGTGG TTTTAGACTA GGTCAAGTGA
AAGTCTACTT ATAACGATAT AATAAAATAG AGATTGGAGT TC
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| Protein sequence | MAYTKTQTFG RTTNGSSTSA HCKPVKAKCV DNQSLVDALV AKRSTLGSNN YSRTLRKATE
SLAKQKEAVQ SYAQAKALSG IGDHVANLLF PAAKLKSAES PASSVGSTKS TASRSRPRNT
LPTADPVEKP SAREIAYQNA VQHATAWKSL SLTWRAVLLI DQRETQSDHV IAKCRMSGIP
CEARSLPIGD MAWMAQGMDT AGKIKAELML GTIVERKTVD DLKASLFGTR YNEQQLRLMH
SGLPQVLFLI EGDLTKDLRG CSVETMHTAT WEIRLHKDFQ ILQTAHLDET VQTLKRMHRR
VLQRSFPRAF VTQALPTFSE TDTSVNDKQA KRRSTDQAAP RKNRRRRLQS LMEMMFDVDP
TPMPGTERFI TYAELKAKVE YDRELGTRTI GSIHSAMLKQ VQSFSDRKVQ ALCRTYSTAN
ELFLAYESVN DVASKKALVT ELPISDPSSH QLRKTGPKSA EELYTVYGMD EGISPPASIS
KDGTKPSLTA AWMPSPIQEE DDEDLWPNGD PNVKKYVESQ MPFTSIDSQP MDIPLARCLI
SKSAASEQQP LSEVNIDKAS RSEAQDEDLG DAFKGIGSSA PISSVCKRGV SKPLTAPTKA
VNVDDYIDLL SSDNDEGGET DTAEPFAKCE KELDCLHFSG VVEQKAELAE FNIRSPAPVV
VSQSRASFTA PSSLFSSDDD DASVFQRSPL RSKRKPFSAV GNSSCKKARF GCETEQTRTK
RSAGNKAASP EVVVLD
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