| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54598 |
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| Symbol | |
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| ID | 7201840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011678 |
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| Strand | - |
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| Start bp | 678942 |
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| End bp | 680603 |
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| Gene Length | 1662 bp |
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| Protein Length | 530 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181051 |
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| Protein GI | 219120633 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.954409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGAGGTTGGT GAGTGTTGTA TCGACCGAGG GGCCGACATC GAAGCTAAAG AAAGACGTGA
CGCGACTTGA TGGTTGCGCG TTTTCGGACG CCGTGTAGAG CGCTTCTACT GCTGGTCCTC
TCTATATGTT TCCAAGCGGA CGAAATCGAC GCGTTTTCGT CCTTTCTCCC AAACGTGTTT
CGTGGCCATG CTACAAAAGT TCCGACGACT TTGCCAAAGG AGGACTTGGT CAATTTGAAA
CGGAAAGTAG CCCCGCTTTA CGAAGCCTCT TCTGCTATAA CGAACGAGGA GGATCTCCCC
TTGCCAATAT CCATTCCACC ACTACCGAAG AAGGCCAGCA AACGGCAAAT GATGTCGTTT
GCCATACCCG CGCTCGGAAT TTACCTGTCA AACCCACTAC TATCCAATAT TGATAACGCC
TTTGTTGGAA GAACTGTTGG AACCGCTGGC CTGGCAGCGT TGTCTCCCGC AACCATTTGT
ACCGACCAAA TGCTGTATTT GTTTTCTTTC CTTTCCCGAG CTACCACAGG TCTCGTATCG
CGCGCTTACG CAGCAACGGA CGACGGTCAA GGGGACCGAG AGGCAGCTTG CGACGCCGCT
TCAGCTCCTT TGACAATATC GCTTCTGTGC GGGCTGGTCC TAACCATCGT GTACGCTCTC
TGGACGCCCC GCATGCTGGT GGCCTTCAAT GTGAATCCCG CGCTGCGCGC ATCGGCCGCG
TCGTACATTT ACTGGCGTGG AGCTGTGGCC TGGGCTGCCC TTGCTCAGAG TGTATCGCTT
TCCGTCATGA TGGCCACACG CGATGCCATC ACGCCGCTCA AAATCATCGG ATTAGCCGCT
CTTTTCAATA TTGCTGGAGA TGCTTTATTG TGCGTGTGGC CAGTTCGGTG GGGCTGTACC
GGTGCCGCTG CTGCCACGTC GCTGGCAACA CTGGTGAGCT CGGGCTTCAT GCTGGCGGCG
CTGCGGAAGA AAGCGTTGTT GCCCAAGGTG CGACTACCTT CCAAGGAAGA GCTGGGAGGA
CTTATGGAAT TTACTGGACC CCTCCTGGCG ATCACACTGA CACGCCTGGG AGGATTCATT
GCCATGCAAA AAGCAGCGAT GGGACTGGGC GTCGGGCCGT TGGCCGCGTA TCAGCTCAGC
ATCAACCTTG TCATTTTCTT TTTGCTCTTT GGTGAACCTC TCAGTCAGTT GTCGCAAACA
AAACTACCGG CATTGGTAGA TCAAGGTGAC GGTGATGCTG TCCGTGCGAC TTTGAAGTCG
GTCCTTACAT TGGCAGCCTT TGCCGCTGTA GGCGTCGGTG GTGTGGCGTA TGGTGCTATT
TCGTGGGGGT CCAGTGTCTT TTCAGCCGAC ACGGCCGTGC AGCTGCTCGC AAAAGAAGCC
GCTCCGGCGG TATTCATGTC CGTGGCGGTC GCCATTTTTA CAGTCGCCGT AGACGGTGCT
ATGTTGGCTT CTCGAGACTT TGGGTTCATG CTGACGGTCG GGTTGGCTAC TTTCCTAGCG
CAAATTGCGC TGCTACGAAA CCATTGTTCG TCGCTCAGTT TTGTGTTTGG GACTTTTACG
ATGCGGTTAG GGGTCTATGC TGTTCTAGCT ATGATGCGGG TAGCCTCAGG TCAGGGGGCT
TTGGGGAAAG TTATTCGCAA GAAAGCCGAT ACAGTAGCGT AG
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| Protein sequence | MVARFRTPCR ALLLLVLSIC FQADEIDAFS SFLPNVFRGH ATKVPTTLPK EDLVNLKRKV
APLYEASSAI TNEEDLPLPI SIPPLPKKAS KRQMMSFAIP ALGIYLSNPL LSNIDNAFVG
RTVGTAGLAA LSPATICTDQ MLYLFSFLSR ATTGLVSRAY AATDDGQGDR EAACDAASAP
LTISLLCGLV LTIVYALWTP RMLVAFNVNP ALRASAASYI YWRGAVAWAA LAQSVSLSVM
MATRDAITPL KIIGLAALFN IAGDALLCVW PVRWGCTGAA AATSLATLVS SGFMLAALRK
KALLPKVRLP SKEELGGLME FTGPLLAITL TRLGGFIAMQ KAAMGLGVGP LAAYQLSINL
VIFFLLFGEP LSQLSQTKLP ALVDQGDGDA VRATLKSVLT LAAFAAVGVG GVAYGAISWG
SSVFSADTAV QLLAKEAAPA VFMSVAVAIF TVAVDGAMLA SRDFGFMLTV GLATFLAQIA
LLRNHCSSLS FVFGTFTMRL GVYAVLAMMR VASGQGALGK VIRKKADTVA
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