| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54558 |
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| Symbol | TRD3 |
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| ID | 7201392 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011677 |
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| Strand | + |
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| Start bp | 956639 |
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| End bp | 957974 |
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| Gene Length | 1336 bp |
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| Protein Length | 288 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | TRD3 |
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| Protein accession | XP_002180547 |
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| Protein GI | 219119580 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000340387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGAT TTTTTTGACT ACGTTTATGA GGGATGTATA TCACTTACAA TTGCAGGTGT
GTTCGCGAAC GACTTCACAA TCTTCCGCGC TCAAACAACT AAAACGTGAA GAGCTCCATT
CTCCAGATTG TTTCTTGCGT CGCCCTCTTG GCTCTTTTGG CTTTGATGGG CTTGGTCGCC
AAGGGAACGA TTCAGAAGCT GGGGGCTACT TTTGCTGTTG AGGCGGTGCG AAACGCTTCC
TTGCTACGCG ACCGCGTCTT TTAGTCCAGT TCCTACGCGG GCAAAATCGG GCGCCCAGGT
GGAGCCTAGG AGACAGCGAT TCCGACTCCG ACTCTACCGG AAGTCTTCGT AATGCAACGG
CGGAGAGTCC GTGCCTGGAT GTGATGGAGG AGCCACGACG GGAGCCGTAG CGACTTTTGC
AACGATCCAA ATACTGGCGT CCGTCGCCGA CACCCCCTTC CCCAACTCCT CCTTCCCCAA
CGTCTATGTC CCTTTCCTAC GTGGGCGACA ATGGACGGCC AAGCGGATTC TTTTTCCCTC
GGAAACTGCC AAGGAGACTG CGATTCCGAC TCTGACTGTG CAGGCAGTCT TCATTGTTTC
CAACGCAACG GATGAGAGTC CGTAACTGGA TGCGATGAAG GCTGCTCCGG CCCGAGTCGC
AACGACCCCA ATGGCGGCGG TAGAAGTCCG TCGCCGACGC CTCCGTCTCC AAGTCCTCCA
TCTCCTGCTC CTCCAGCTTC GGGACGCTTC AATCTCAAGC TCTACTGGGA AGAAGGATAC
TTTTGGCAAG AAGAGCGGAT CGAACGCAAG TGGTGCATGC AGTGCCGAGG TGGATGCCGT
ATCGGCAAGG AATTGAAGAT TGTGGACTGC GATGGAGGTC GTCGCGGTAA CCCCGACAAC
TTTCGCTTTA TCCAACACAG TGGAGGCGAA ATTCAGATCC AGGAAGACAG CAGTGAACTC
TGTTTCCAAC GGTCTGGTCG CGATATTTCT CTTCAAAGAT GCAACAGCGG CAACTCCAAT
CAGCGTTGGG TTGCAACCAG TGGTGGATTT GGCGGGAGGC GCTTCCAGAT TTCACCCAAG
GGTCGTCGGG GTGACTGCGT GACTCAACGT CATCACCCCA AGGATGGAGA GATCGTCGAG
ATTGAGCCAT GTGCTACGGC TCAAAAGGGA GATACCTCGT TTTGGAATCG TGCCTAGAAC
TCGTTTGTGA AGCAATGGTG GTGTGTGTCG CTTGGTGGAT AGTGAGATGA AATTTCTGTT
ATGTTTCGAA GATAAGATTA GATTGAACGT CTAGCTAGTC TCGAAGTACC AACAATAAAC
GACGTATGGA GAGAAA
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| Protein sequence | MGLVAKGTIQ KLGATFAVEA SVPGCDGGAT TGAVATFATI QILASVADTP FPNSSFPNVY
VPFLRGRQWT AKRILFPSET AKETAIPTLT VQAVFIVSNA TDESCSGPSR NDPNGGGRSP
SPTPPSPSPP SPAPPASGRF NLKLYWEEGY FWQEERIERK WCMQCRGGCR IGKELKIVDC
DGGRRGNPDN FRFIQHSGGE IQIQEDSSEL CFQRSGRDIS LQRCNSGNSN QRWVATSGGF
GGRRFQISPK GRRGDCVTQR HHPKDGEIVE IEPCATAQKG DTSFWNRA
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