Gene PHATRDRAFT_54528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_54528 
Symbol 
ID7201362 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp399272 
End bp401167 
Gene Length1896 bp 
Protein Length385 aa 
Translation table 
GC content47% 
IMG OID 
Productenoyl-coa hydratase 
Protein accessionXP_002180629 
Protein GI219119752 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGATCAGATA CCATCAGGTG TAACGCAGCT TGTGCATCAA ACGCTACCCA CATTAATAAC 
TGCTGTCCTT TATGTCGATA CAATGCGATT TACGACTAAA GTTTTACCCT CTCGCACTGC
GAATCTCTTC GTGTTGACGC TCAACAATCC AAAAGCCTTG CATGCACTCT CGCTCGACAT
GATGCACTTT TTCCAAGACA TTCTGAAAGA ATGCTACGCC GATGATTCGG TCGGCGCTTT
GCTGGTCAAG AGCAACACAA CGGGTATGAA AACTAAAGCA TTTTGCGCCG GGGGAGACGT
CAAACGGGTC TATCGGTCGT GCTTAGAAGA GCAAGACTCT AGTGTGTTGG GACAAGGCAA
GCCTGGCCTT GATTCGGCCG AATTCTTTCG ACAAGAATAT GTTGTAAATC ACATGATGGC
GACAGCTACG AAACCACAAA TCAGCTTGTG GGATGGAATC GTCATGGGTG GTGGGGTTGG
GATCTCGGTT CATGGCAAGT ACCGCATTGC CACAGAGAAT ACCATTCTTG CCATGCCTGA
AACGAACATA GGTCTCTTTC CGGACGTTGG GAGTATGTTT TGGATGCCAA AGATGTTGCC
GCATAGTGTG GCTACTTATA TGGCCTTGAC GGGACATCGG CTAGAAGCGG CAGATCTACT
TTACACAGGT ATTGCTACTC ACTATATACC GTCTGCGAGA TTGGATGATT TGGAATCCGC
TCTTAGCACG GCTTCTAAAA GCTTTAAACC AACAGAAAGA GCGGAAGACT TTGCCGCGCC
CGTGCTTATG TCTTTCCACG AACAGCCACC GATGGATCCG CACGATTCAT ATCTCGCACA
AGAGCGGCCA GCCATAGACA AAGTATTCGG GATTCTTTCG GATCGATCAA AAGGAGTTGA
GGATGTTGTC GAAAGTTTGG AAAATTTAAA TTCTGATTTC GGCAGGAAAA CAGCTGGCAT
ACTAAACACA ATGTCACCAA CGAGCCTCAA AGTTACACTG GAAGGATTGC GACGAGGTAA
GGATATGTCG AGGATCGGCG ATGACTTGTG TATGGAGTTC CGTATGTCGC AGGCCTGTAT
GCGGATTGGC AGTGATTTTC ATGACGGCAT ACGCGCTGCA CTAGTCGACA AGGACCGCAA
CCCACAATGG CAACCAGCAA CGTTAGCTGA AGTGACGGAG CAAATTGTAG AATCGTACTT
TTTACCTCTC GAATATGAAT GGGAAATCCC CGTCACCAAG ACAAAGATTT CATCAAATTT
GTAGGTGACT TAAGGACCCT GCGCAAAACG GTCGCTCATG CCGGATCAGG GTACAGTCCG
ATTTGATTCA AGATCGGGAT AGGCTGGAAT ACAGGCTCTG TTTGGTTCAC TATCGTAGTT
TGGTTTCGTT TCGACCATCA AGTACGGAGG GCGAGGTTGC TATGAATGTG AATCCAGTTC
AGTAGATACA CGAATTATGG CGTCGGTCAG CAGTCCAGCC CGCATCGCCT GTAACGCACA
GCAAAATCGA GGGATCAACG TTCGGGTTTT ATGAGAGAAA CAAATTTAAT GTTACTTCCA
GGGGTAGAAA TATCTCTAAA ACTCGCTCTC TGATAGAGTC CCCCTCCCCT CCCATTTCAA
CAAATCGGGT TTCCCGCAGC ACACAACGAA CATATTCCAG ACCGCACCAC GATTTCGAGT
TCCTGATGAC TGTGAATAAC ATCCCTACTG GCTCATGTTT GAATGATGTT CAACGTCTAC
TAATATTCAT TGCAGCCAGA AATGTTAGTT GTCAGAGCTA TCAGTGATGG AAGATTCGGA
TGTAAGACAT GCCGAGGATT AATGGATCTG TCAAAAAAAT TTGCTCCCGT ATTTCAAGTC
CTCATAGGTC ATGGACGAAA ATAAGATTTG GCCATC
 
Protein sequence
MRFTTKVLPS RTANLFVLTL NNPKALHALS LDMMHFFQDI LKECYADDSV GALLVKSNTT 
GMKTKAFCAG GDVKRVYRSC LEEQDSSVLG QGKPGLDSAE FFRQEYVVNH MMATATKPQI
SLWDGIVMGG GVGISVHGKY RIATENTILA MPETNIGLFP DVGSMFWMPK MLPHSVATYM
ALTGHRLEAA DLLYTGIATH YIPSARLDDL ESALSTASKS FKPTERAEDF AAPPPMDPHD
SYLAQERPAI DKVFGILSDR SKGVEDVVES LENLNSDFGR KTAGILNTMS PTSLKVTLEG
LRRGKDMSRI GDDLCMEFRM SQACMRIGSD FHDGIRAALV DKDRNPQWQP ATLAEVTEQI
VESYFLPLEY EWEIPVTKTK ISSNL