| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54477 |
|---|
| Symbol | ACL |
|---|
| ID | 7201075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011676 |
|---|
| Strand | + |
|---|
| Start bp | 383601 |
|---|
| End bp | 386910 |
|---|
| Gene Length | 3310 bp |
|---|
| Protein Length | 1082 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | atp-citrate synthase |
|---|
| Protein accession | XP_002180032 |
|---|
| Protein GI | 219118523 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCGA AGGCAGTGCG CGAGTTCCAC GGCAAGAAGC TGATTGCTCG TCACGTCCAC
GAAGTTTCCG AAGGCAAGCA TTCAATTGAT GATCGGAGTG TCTTGATCAC GACAGAAACA
GACCTGGAAA CCTTGCCTAT TTCCGAAACC TGGTTGTCCG ACACTCTTTT GGTAGTCAAA
CCGGATCAAC TCATCAAACG ACGGGGCAAG GCCGGTTTGG TCGGGATTAA GCTCAATTGG
CAGGGCGTAC AGGAATGGGT TAATGCTCGT ATGCAAAAGG AAATTCAGAT TGAGCACGCG
ACCGGCACGT TGGATCACTT TATCGTGGAG CCGTTCGTCC CACACGAACA GTCGGACGAG
TATTATATCT GCATTCAGAG CGATCGAGAA GGTGAAGAAA TCCTTTTTTG CGCGGAAGGT
GGTGTGGATG TAGGTGATGT TGACACCAAG GCAAAACGCT TGCATGTCGC TATTGATGAT
GACTACCTCA CACCGGATCG CATCTTGGAA GCGGATCTGT TGGAGGGCGT TCCGGCCGAT
CGTCAGGATA GCTTGGCTTC CTTTGTGCTC ACACTCTTTA CCGTCTATCG CAAACTCAAT
TTTGTTTACA TGGAAATTAA CCCCATTGTG TACACAGCTG AAGGTACGAT TGTTCCTTTG
GATTTGGCTG CCAAGATTGA TGAAACGGCG GCATTTCTGA ACGCCCCTGA CTGGGGCCAT
TTGGATTTTC CGGCACCCTT TGGTCGCAAG GAGTTTCCAG AAGAAGCGTA CATCCGCGAC
CTCGATGCTA AGACAGGAGC CTCGCTTAAG TTGACAATTC TAAACCATGC TGGCCGAGTT
TGGACCATGG TCGCAGGCGG TGGTGCCAGT GTTGTGTACG CCGATACCAT TTCAGATCTC
GGTTTCGGAC ACGAGTTGGC CAACTACGGA GAATATTCGG GAGCGCCCAG TACGGAACAC
ACTTTCGAGT ATGCCAAGAC GCTGATAAGT CTCATGACAC GCGAAAAAGA TCCACGAGGC
AAGATTTTCA TTATTGGCGG GGGGATCGCC AATTTTACCG ACGTTGCTGC TACCTTTACC
GGTCTCATTA AAGCGATCAA GGCCTTTCAA GAAATCCTGA AAGCACATCA CATCAAGATT
TGGGTCCGCC GTGCGGGTCC GAATTATCAA GAAGGTCTGC GCTTGATGCG CGACTGTGGT
GCGGAGACAG GTTTGGACAT TCACATTTAC GGACCCGAAA CGCACGCTAC TGCTGTGGTG
CCCCTGGCGC TTGGTCTGGC GAAGGCTGGC GACTTTCCCG AATTTGATGA CCCCCGTGTC
CACGAGACTC TACCCAAGCG AAACAGCAGT AAAGCCTCAC TTGAAGAATT GTCGAAGATT
GAATACACAG GGCAAGTTGC GGACCACGAA GCAGATCACA ATGTCGAGAA CTTTACTGCT
TTGACCCGCT GTGTCGTTTA CGGTATGCAA CATCGCGCTG TTCAGGGTAT GCTTGATTTC
GACTTTATGT GTAAGCGAAA GAAACCATCT GTCGCGGCCA TGATCTTTCC GTTCTCTGCA
AATCATTTTG TAAAGTTTTA CTGGGGAACC GATGAAATTA TGATGCCAGT CTACCAAACA
ATGGAGGAAG CCTTCAAAAA ACATGCAGAA GTGACGGTCG TTGTGAATTT CGCATCCTTT
CGCTCAGTGT ATAGTTCAGT CTTGGAAATG CTGAACTTTT CCGAGCAGAT AAAGACTATT
GCAATTATTG CAGAAGGTGT TCCAGAGTCT CAGACGAGAG CAATAAATAT TGCAGCTCAA
AAGCTCAATG TCGGAATTAT TGGCCCAGCA ACAGTGGGTG GGATTAAGCC CGGTTGCTTT
CGTATTGGTA ACACTGGTGG AATGTTAGAC AACATCGTTA TGTCCAAACT ATACAGGCCG
GGATCAGTTG CCTACGTGTC CAAGTCAGGA GGTCTATCCA ACGAGTTGAA CAATTTAATC
TGCCGAAATT CAGACGGTGT GTACGAAGGT GTGGCTATTG GAGGAGACCG TTACCCAGGC
TCACGCTTTA TGGACCACTT GTTGCGATAC AACGATAATC CGCATGTTCA CATTTTGGTC
CTTCTTGGAG AAGTTGGAGG TGTTGATGAG TACGAGATCT GTGGGGCCCT AAAGAGTGGC
AGGATCAGCA AGCCATTGGT GGCATGGTGC ATTGGCACTT GCGCTTCTAT TTTCCCATTT
GAAGTCCAGT TCGGTCACGC TGGTGCGTTA GCCCGCGGAG ACATGGAAAC GGCTCGAGCC
AAAAACAAAG CATTGAAGGA GGCTGGAGCC CATGTACCAG AGAATTTCTT TGAGTTTGGC
GACGTGATCC ACGAAGTTTT CGAATTTCTC GTAAACAGAG GCTCTCTTGT ACCCGCACCT
GAACCAGAAC CACCCAAAGT ACCAATGGAC TACGCGTGGG CAAAGCGCCT CGGCTTGGTC
AGAAAGCCTG CGCACTTTGT TTCATCGATT TCCGATGATC GTGGCGAAGA GCTGCTGTAT
TGTGGAATGC CGATCAGTGA GGTCTTCGAG AAGGATCTTG GCGTTGGCGG AGTTGTGTCA
CTTCTCTGGT TCCGTCGGCA ATTACCCACC TTTGCTTCCA AATTTATTGA AATGATTCTA
ATGGTCACGG CTGACCACGG ACCAGCCGTA TCAGGCGCGC ACAACACAAT TGTTGCAGCG
CGGGCGGGCA AGGATCTAGT ATCTTCTCTG GCAAGTGGCC TTTTGACAAT TGGACCTCGC
TTTGGGGGAG CGCTCGATGA AGCAGCTGTA ATGTTCAAGG AAGCTAGTGA CGCAGGTTAC
GATGCAGAAC AGTTTGTCAA GAACATGAGG CGAAGCAACA AGCTAATAAT GGGCATCGGG
CACAGAATCA AATCATTGTC AAACCCAGAC AAACGCGTTG AGATTATCAA GAACTATGCC
CTTGACCATT TTTCCGACAA CACCGTGCTA AAATTTGCTC TTGCTGTAGA ACAGGTTACG
ACAAGGAAGA AAGCTAATCT TATTCTGAAT GTTGACGGAT GTATTGCTGT TTGCTTTGTC
GATATGCTTC GCGGCTGTGG AGCGTTCAGT AAAGAAGAAG CTGACGAGAT GATACATAAC
GGATGCCTTA ACGGTCTTTT CGTCTTGGGA AGGTCCATTG GATTTATTGG TCACTATCTG
GACCAGAAGC GCCTTAAGCA AGGCCTGTAC CGTCATCCGT GGGATGATAT CAGTTACATT
AATGAATGAA AATGATTTGA AACATATCAA GTTAACAACA TAAATATCGA TAAAGCTTCA
TTGGGAGCTG
|
|---|
| Protein sequence | MSAKAVREFH GKKLIARHVH EVSEGKHSID DRSVLITTET DLETLPISET WLSDTLLVVK
PDQLIKRRGK AGLVGIKLNW QGVQEWVNAR MQKEIQIEHA TGTLDHFIVE PFVPHEQSDE
YYICIQSDRE GEEILFCAEG GVDVGDVDTK AKRLHVAIDD DYLTPDRILE ADLLEGVPAD
RQDSLASFVL TLFTVYRKLN FVYMEINPIV YTAEGTIVPL DLAAKIDETA AFLNAPDWGH
LDFPAPFGRK EFPEEAYIRD LDAKTGASLK LTILNHAGRV WTMVAGGGAS VVYADTISDL
GFGHELANYG EYSGAPSTEH TFEYAKTLIS LMTREKDPRG KIFIIGGGIA NFTDVAATFT
GLIKAIKAFQ EILKAHHIKI WVRRAGPNYQ EGLRLMRDCG AETGLDIHIY GPETHATAVV
PLALGLAKAG DFPEFDDPRV HETLPKRNSS KASLEELSKI EYTGQVADHE ADHNVENFTA
LTRCVVYGMQ HRAVQGMLDF DFMCKRKKPS VAAMIFPFSA NHFVKFYWGT DEIMMPVYQT
MEEAFKKHAE VTVVVNFASF RSVYSSVLEM LNFSEQIKTI AIIAEGVPES QTRAINIAAQ
KLNVGIIGPA TVGGIKPGCF RIGNTGGMLD NIVMSKLYRP GSVAYVSKSG GLSNELNNLI
CRNSDGVYEG VAIGGDRYPG SRFMDHLLRY NDNPHVHILV LLGEVGGVDE YEICGALKSG
RISKPLVAWC IGTCASIFPF EVQFGHAGAL ARGDMETARA KNKALKEAGA HVPENFFEFG
DVIHEVFEFL VNRGSLVPAP EPEPPKVPMD YAWAKRLGLV RKPAHFVSSI SDDRGEELLY
CGMPISEVFE KDLGVGGVVS LLWFRRQLPT FASKFIEMIL MVTADHGPAV SGAHNTIVAA
RAGKDLVSSL ASGLLTIGPR FGGALDEAAV MFKEASDAGY DAEQFVKNMR RSNKLIMGIG
HRIKSLSNPD KRVEIIKNYA LDHFSDNTVL KFALAVEQVT TRKKANLILN VDGCIAVCFV
DMLRGCGAFS KEEADEMIHN GCLNGLFVLG RSIGFIGHYL DQKRLKQGLY RHPWDDISYI
NE
|
|---|
| |