| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54378 |
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| Symbol | GAPN |
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| ID | 7199937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011674 |
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| Strand | + |
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| Start bp | 700294 |
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| End bp | 704988 |
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| Gene Length | 4695 bp |
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| Protein Length | 588 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | XP_002179275 |
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| Protein GI | 219116961 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAGTGTGTGT TTACTACGGA CCTTCACTTT CAAGCACGGT AAAGCGTTGC CGAAAAGAAA
CGACCGCTAT TGCACGGCAG CTAATTCTAC GAAGCGCGGA ACTTTCCCCT TTCACATTTT
CCCACAGTCT ATAACAGAAA TGAGATTCTC TTGCAGAGCT GTGGTATCGC TCCTGCTGTC
TTCTTGCTCA CTCATACTTG CCTCTGATGG CGAAACCAGC GCATCTTTTC TTGATCAGCC
TCCTCCAGTG ATTAAAAAAC CTATTCCTTG GCTTCCGGTC GTTCCCAACT ATGAGAACTT
GGAATGGAAG GACGTGACTG TTTGTTGCCG ACGATCTAAC CCAAGCGTAG ATACCAACAC
ATGCGCGGAC AACGTTCCGT TGATAGTCGA ACCCACCACG ATAGGAAGCA TGCCTCAGTT
TACAACTGAT CAAGCTTTGG AGGTTTTAAA ACAAGCGAAA GAGGCTTGGA AGGGCGGTGC
GGGTGTCTGG CCACAAATGA CGTATCAGCA ACGCATAGAA GCCATTGAAC ACTTTTTTGT
CGAACTCGCA GCTTCGCGGG AAGATATTGT CGAAACACTT ATGTGGGAAA TCGGTAAGAA
TCGAAAGGAT GCAGAAAGCG AGTTTGATCG CACGTTGCAA TTTGCTCGAT CGGTGATTGA
CGCGATCCAG ACCGACAACA ACTTCAATGG TACCTGGCAA GAAATTGGCA ACGTTCGCGC
TCTAGTGCGC CGAGCTGCCA TTGGCGTAAT TCTCTGCCTG GGGCCGTACA ACTATCCTCT
GAACGAAACT TACGCGACCC TTATTCCGGC CTTGCTTTTG GGAAACATTT GCATTCTAAA
GATCCCGACA ATTGGAGGGC TTGTACATTT GCAAACGATG GAAGCGTTTG CGAAATCTTT
ACCACCAGGT ACAATTCACT TCATTGCGGG TTCTGGTCGT GAAACGATGC CGCCGTTGAT
GAAAACAGGA GAAGTGGACG GTCTCGCATT TATCGGTGGA TCGAGAGCAG CGGATGATCT
TATTCACCAG CATCCTCACC CTCATCGTCT GAAGGTTTTT CTTCAACTTG AGGCAAAGAA
TATGGGGATA TTTCTAAAGG ACACCTTCGA GAAGAAGAAT GCTGCAATGC TAGGACACGC
CATGGATGAG ACTTTATTGG GAACGTTGTC GTATAATGGA CAGCGGTGTA CAGCTATCAA
ACTGCTTTTT GTACCGTCAG ACGATGCACC CAAATTTGTA GCAATGTTGG TCGATCGCGT
CAGCTCACTC GTCGTTGGGC TACCTTGGGA TCAAAAAGAC GGCACATTTT CGCAAATTAC
GCCACTCCCC ACACCGCAAC GTGTTGAATA TATGCGAGAA TTAATTGACG ACGCGGTGTA
TAAAGGTGCA GAAATCCGTA ATGAAAACGG CGGAAACTTG ATTGGTGGTG TAGATTCGAC
ACTCATGGTC CCTGCTGTCC TCTACCCTGT CACTCCCAAC ATGAGAATTT ATCATGAAGA
ACAGTTTGGT CCCATTATTC CTGTAGCTAC CTATGATGAT TTGGAAACCG CTCTAGAATT
CGGGCAGAGC GGAGAGTACG GCCAACAAGT TTCGGTGTTT GGAAGTGACT CTGATTCTGT
GGCATCTATT ATAGATCGAT TCAGTGCGGT TTACGGGAAA GTGAACTTGA ACTGTCAATG
CGGGCGCTCG CCTGACACTC TGCCTTTTGC TGGTCGCCGG TCGTCAGCTA TGGGAGTGAT
GTCAGTTACC GATATACTAC GAGAGTTCTC AGTCCCAACC GTCATATCTT ACAAAGAGCA
AAACGGCTTA AACGATGAGC TCCTGCAAGG CACACAACTA AAATCCAACT TTCTACAGCC
CGTTACAAGG ACATCTTTAT CTACAATCAG AGCAAACAGA GAATAAAACA AATGAGGTCT
CTTTTGATTA GTCAATGTAA ACAGTGTATT TCGCGTGTTT CCTGGAATGC TTATAGGCTC
TGTCACCTAC CACTCATGAC CCTCTGTTTT GCCGAAGCTT TTGGCTTGAT TTTTCAGTAG
ATCCTTCACA TTGATATTTT TTATTCTTGT TCCACGCCTA GAAATAGCAA TAAGCCTGTA
ATGCTTTGTA ATTATTGGTG ACAAAGCAAG TTTGCTTTGG AAGTGTAGCA AGATTCATGC
TTAGCATGAA TGTAGCAACA CCATTTGGTC TATTTCCACG GCAAAAGAAT GTTATTGTTG
TTTGTCTCTA TTCCCCAGCA GCAGACAAAT TTTAGCTTCC CATGGGGCCA TTGTTTTATT
GACTGTGAAC ACCGTTTCTT GTCAAATACC TTTCCATGCA CAACAGAAGT GATTTGTGTC
TACCTTACTA AGCCCTGTTC AAATCACAAA GCAGCCAGCC CACATTTATT GCAAATGAGT
TTCAAGGGGC AGGAAAGTAC TTGGAGGGTG CAGTTGTGGA CCATAATTGG TCCTGGCTAC
TGATCTCAAA CTTTGCAATG AGTATGATGA TGCCTTTTCA ATTTCAAAAC CAGTTGTCAT
GATTGGCCTG CTGCCATGCA TTCATACGCC TTGTCTTTCT TGGAGGGAGC ACTGCAAATT
CATCAGGCGT CGTGGACTGC ATATTCCATA ATCTGTGATG ACGGAGATAG CGTATTGTGT
TTCGGCACAG GAGGTCCAAA GCAAGTGCCA AAAAACCAGT GGTCTTGCTG TTGGATACAA
TCTCTATGTA AACAGCTCGA CTTACTTGAG AGCTCCATAA TCCAAGTATA TTCTTTTCAA
TCGACTCAAG CTCCACTTCG TTGCGTGTCT TCGGGTCATT TAAAATGGCT TTCGGATCGA
GGATGTCGCC AACATTGTCG TAGCCGGAGA ACTCTCCTGT CAATTCAAAG AATGCCGTTT
CCAAAGTCAA AATACCTTGC TTTGCCGTCT CGAAATCAAA GGCATAGTCT TTCATCGAGT
TTGTCCACAA AGCTCGCTGA CCACTCTTTC CTCCCCATGA GTTTTCGTAG CTTCGGATTT
TCAACTTTGG ATAAAGTTCT CCTTCACGCT TTACCATCAA ACGAGCAAAG GCAATAGGAC
TTGCTGCGTA CGGTGCCTCA GCAGCACGGC CACAATATCG ACCAACGCTG TTCCTGTACG
CCAAAAATGA CGCATCGTTT TCAAAATAGC CATTATCTGT GGTCCACTTC CTAAATCGAA
GTAGACTTTG AAGTAAATTG TCACCATCAA CCCAAAAAAT GTGACCACGA TCCGTTCGTA
CTCTCCACAC AGCAACCTCG ACAATTTGAA AACGCTGGTC AGTATCTTCC TTATCTGAGT
GGTCGTAATC TACGGTCCCC TCCTTGTGCA CTTTTACTTT GTCTCTCCGT AGCATCCAAC
CAGAAACTAT TCCATTTTCA TAACGCGCGA CGCTGTCCTT CTTGGAAGGA TCCAAAGCTT
GGCGAATTCT TACACATTGT CCAACAGCAG AGGGACGCAA TTCGATGTTT TCAAGTAACG
TGCCTTCTTG CTCTCGAAGT GCTTCCATAG CTGACTTAAA AAGTATCTCG TCGCCCTCCG
TTCGAAAGCC AAGACCATCA TGTTCTGCCT CTCCATTTTC AGGTAGCGCC TCGTCCTCAA
TTTCAATGAG TAGCCTGTCT TCTTTGCCAA AATCCTGTTT ATCATCGGCC CCGACAGTTT
CTTCAAGAGC ATCTTTAAGA GCTGTCTTCA ATTGATTTTC ACGTACACCT CTACTGTCGA
GATTTTTAAT CACCGATCTA AGCGATTCTT CTGTTAACTG GCATCCCCAA TGAGATTTGG
TCAGCGTTGG AAAAGATCCT GATGTGTGAT ACTCAAGACG GCCAAAGACC TGTACGGCTT
CTGGAGAATC GTCATCATCA CCACCGACTC CGGAAAAATC CTCTTCCATG TCTCGTGCAC
CAACCGTGAT TGACTCTTCA TCTTTTTGTA GCTGTAGGTA GCCACTGGTG GGTTCAGTCG
AAACACCCTC AATTTGTATC ATATACTCGG TCTCCACCCA GACCTTCCCG TGTTCATCAT
TGTCAAAGGT CCAGAATCGG CTACCAAAAC GATCTCGACC AAGTGGGTCG CTCCGAATGA
AGCACTTGTT TCGCTTGGCA ATTAAATCTT TAGTGGCATC GACGACTTTC TTGTTTTGCT
TAGCGTTGTC TAGCTCCAAA GCTGCATCAC GCATAAGATC CACAGCCCAA ACACCACCGG
TTTCATCGTC GAGTCCAGTC AATTTTGCTT TCTTCGCAGC AGTTATAGCA CTTCGCAAAA
CCTTGATAGT CCCATCCTCC ATCGCATCTC TGAGCTGCTC TAATGCGCTT TCACGTAAAA
GAGGTAGACG ATTTGCTTGA ATCTTCGCTT TCTCAATGTC GCGACAAAGT CTGTCTATTG
TACGAACAGC GTCTCGATCA AGAGAAGGAT CATCCAAGAC TTCTTCGCCA CCATATCCAG
ATAGCTCTCC TTCCATCTCT TCTAGTTCAT TTTTCTCTCG CTCAACTAGT TGCTCAAGTG
ACACTACTCT CAGTGCGTCC GTATCGAACG CTGCTTCTTC TTGCATTCGT ACAACCATTT
TGCTTATTTG AGTTTTGCTG AACGTATCTG GTCCAGGCAG GGCATCGTAC TCAGACTTTA
TGTCCTCGTC AAAATCCAGA ATATCTTCTT CGGTGAGCGA CTCAATGAAC TCGTCAGAAA
ATTCCTTGGA CTTGT
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| Protein sequence | MRFSCRAVVS LLLSSCSLIL ASDGETSASF LDQPPPVIKK PIPWLPVVPN YENLEWKDVT
VCCRRSNPSV DTNTCADNVP LIVEPTTIGS MPQFTTDQAL EVLKQAKEAW KGGAGVWPQM
TYQQRIEAIE HFFVELAASR EDIVETLMWE IGKNRKDAES EFDRTLQFAR SVIDAIQTDN
NFNGTWQEIG NVRALVRRAA IGVILCLGPY NYPLNETYAT LIPALLLGNI CILKIPTIGG
LVHLQTMEAF AKSLPPGTIH FIAGSGRETM PPLMKTGEVD GLAFIGGSRA ADDLIHQHPH
PHRLKVFLQL EAKNMGIFLK DTFEKKNAAM LGHAMDETLL GTLSYNGQRC TAIKLLFVPS
DDAPKFVAML VDRVSSLVVG LPWDQKDGTF SQITPLPTPQ RVEYMRELID DAVYKGAEIR
NENGGNLIGG VDSTLMVPAV LYPVTPNMRI YHEEQFGPII PVATYDDLET ALEFGQSGEY
GQQVSVFGSD SDSVASIIDR FSAVYGKVNL NCQCGRSPDT LPFAGRRSSA MGVMSVTDIL
REFSVPTVIS YKEQNGLNDE LLQGTQLKSN FLQPVTRTSL STIRANRE
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