| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54376 |
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| Symbol | HSP40C |
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| ID | 7200133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011674 |
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| Strand | - |
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| Start bp | 665990 |
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| End bp | 667353 |
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| Gene Length | 1364 bp |
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| Protein Length | 397 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | |
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| Product | chaperone, dnaj-like protein |
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| Protein accession | XP_002179484 |
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| Protein GI | 219117379 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.893951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCTATAAAAG CAGCACCACC GGGATTAACT GTTACGTAGG AATTGTCTTG CAAAACAGTA
ACACGAATCG GATAGCTCTG GATTTTGCTG CGGTTGTACG GCTTGCTTCG CATCGTATCT
GTCTCGGCCA AAGACTTGGA TCATCAGGAT CATGAACAAA ATGACTTGGT TCCACTTACT
GTGTCTGGTC ATGGCAGGCA TGGCACAAAC CGAAGATTCG ACGGAGTCAA ACGAAACTTT
CGTCAAGGGG ACTTCTGTAA AGGAGTCAAT TGCTAAAGAA AACAATTTTG ATGCGAGCAA
CGAAGACTGG GGGTCTTACT ACGACCCTCA AAATATCTTT TGCGGCAATT TTGACTGCTA
CAAAATATTA GGCTTTGACT ACGAATCGTT CGGAAAAGAG CATCCGACGA CCAAGGAAAT
CACGAAGCGT TACCGTCAGC TTTCGCGTGA ATGGCATCCC GACAAGAGTA AACACAAAGA
TGCAAAAAAT CGTTTCGTAA AAATTGCTCG CGCCTATGAA GTACTCACGT CAATTGTACA
ACGTAAAGAA TACGATGAGT TGCGCTACAA TCAACAAGCG TACTTCGACA AGTATGGTGC
TTCAGTTCTT TGGAGTTATG CGCCCAAAAC CGATACTGCC TTCGTTGTGT TGATCATTTT
CGTTGTGGCC AACGTTTTCT CTTGGTTTGC GCAGAAGCAT CGATGGCAGT TAATTGCAGA
TCGCCTCATC AAGGCTGCGG TCGAGGACTG GACCCCTAGT CAAGGCGGGT CACCGGAAAG
CAAGCAACTT CGAGAGAAGG CATTGGATTT ATTGAATACC AAAGAAAACG AAGATTATAA
GGAACCAGAC GCGCTCACGA GCAAAGTTTC GACTCCCAAA AAGTCAAAGA TGAAGGGGGT
AAAGAAGATA GCCGGTAAAG AGCGAAAGCA GCAAGAGCAA GAGGCAGTAG TTCCAATAAT
TACCGCGCTT GTCAATGACA TGAACGATTT TGGTGGAGGA TTTCATAAGC CTACATGGAA
AGATTTGTTG ATTGTTTCTT TGGCCCGCAT GCCGTACAAA GTTGCGCATG GAATTCTTTG
GCAAACGAAA TACTATATTA GACGCTTGCA AAAGCACGAG CTAAACGAGG ACGAGCAACT
CGTCTTGACA AGACGTGCAG TGGGCCCAGT CTACTGGGAA ACAGCTACTG ACGAAGATCG
CGAGGACATG GTTAAGAAAG AGCTTTGGAT ATTGGAAAAC CTTGTCGAAT GGAACGAGGA
ACAAGAGATA AAAAAACTGA GTGCAGCCGA GCAAAAGTAT TACAACAAGC TGAAAAAGAA
GGGTAAGCTT GATAAATTAG AGTGACGATT GTTTTACTGC TGAT
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| Protein sequence | MNKMTWFHLL CLVMAGMAQT EDSTESNETF VKGTSVKESI AKENNFDASN EDWGSYYDPQ
NIFCGNFDCY KILGFDYESF GKEHPTTKEI TKRYRQLSRE WHPDKSKHKD AKNRFVKIAR
AYEVLTSIVQ RKEYDELRYN QQAYFDKYGA SVLWSYAPKT DTAFVVLIIF VVANVFSWFA
QKHRWQLIAD RLIKAAVEDW TPSQGGSPES KQLREKALDL LNTKENEDYK EPDALTSKVS
TPKKSKMKGV KKIAGKERKQ QEQEAVVPII TALVNDMNDF GGGFHKPTWK DLLIVSLARM
PYKVAHGILW QTKYYIRRLQ KHELNEDEQL VLTRRAVGPV YWETATDEDR EDMVKKELWI
LENLVEWNEE QEIKKLSAAE QKYYNKLKKK GKLDKLE
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