Gene PHATRDRAFT_54279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_54279 
SymbolFBPC4 
ID7197637 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp1130090 
End bp1131694 
Gene Length1605 bp 
Protein Length457 aa 
Translation table 
GC content47% 
IMG OID 
Productfructose-1,6-bisphosphatase 
Protein accessionXP_002178370 
Protein GI219115149 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCAAGATTCG TCCCACCGGT AAAGCACCTC CTGGAAATAG AAACAATAGC AATGGGTAGA 
GGCGTCATCA TTTTTTGTGT GAAGAATTTT GCGGTTTGGC TCCTTATTAT TACTTCTGCA
GTTTCCATCC AAGCGTGGAT CCCATTGCCG CTCTCCGCAA CTGTCAAAGC TCGTATCGAC
TCAACAACGC TTTTTTTCAG TCGATACAAG ACGCCTTTGT ACCACGGCGG GAATGAAGAG
TCTTACGGAC CACCAGCACC CGCTGTCGAT TCCCGATACT ACACATACGT GGAGGCGCCG
GTGCAAAGTT CTCGCTCTCG AGACACGAAG CAGCCCATTA CGTTGAGCCG GTTTTTGAGT
GACGCAGTCA AGGAAAATGC CGAGCTCCGT GATCTAGAAA GTCTTTTTAT GGGCATACAA
ATGGCTTGCA AGACGATCGC GAGTCTTGTT AACCGCGCTG GTCTCGTTTA CTCCATTACC
GAAGATATAC GTGACGATAT TACTGATGGA CGATTCTACA GTATGAAACG ATTGGACCAT
TTAAGGTATA AAGTTAGAAT GGAATTCATC GATGTGAAAG CATCATGCAA GAATATTGAC
TGACCATTTG CTGTTCCTCT CTTTTTTTAC TTTGTCTAGT ACAGTGGTGC TGAAGAACGC
TCTCAAGTAC ACGGGCAAAT GTGAAGTGCT GGCACCCAAA TCTCGTTTGG ACAACGAATC
ACCTGCTCAA CACCAACCGG GTGTCCTAAT TGCTAAAAGT ATGGACAGCA ATTATGTGGC
CTGCCTCGAT CCGCTGGATG GAAGTGGTAA TGCCGACGCA AGCATTTGTA CCGGAACAGT
ATTTGGTGTT TTTGAAAAGG AAACTTCCAC CGGAATAAGT CTTTGGAAAA AGTCTAGAGA
GGATCGTGAT CGTGAATTGG TGGATTCAGT GCTGCAGCCA GGCAAGAACA TGCGGGCAGC
GGGATATTGT CTTTATTCAT CCGCCACCGT TTTAGTTTTT ACATTGGGAG AATCAGTGCA
AGGCTTCACA TTGGATCCAC AAATGCAAGA GTTCGTTCTC ACTCACCCCG ATCTAACAAT
TCCGAAGAGA GGAAGCGTCT ACAGCTGCAA CGAAGCCAAC AGCGAGGGAT GGGATGATGC
CTACAATAGC TATCTAAGAA ACCTCAAGAC TGGAAAAGGA GAAACTGGGA AACGATACGC
TCATCGCTAC GTCGGGTCGA TGGTAGGAGG TAAGTGGACT TCCCGCAAAT GATGCAGCAA
TTCATCAGTC ATGAAGAGAC GAAAGGATTC ACGTTTGCGC TCACCTTTTG GGCAGACATT
CATCGTACGC TCCTTTACGG TGGAATTTTC GCGTATCCCG CTGACAGGCT AGAGCATCCG
GATGGAAATC TCCAACTGCT TTACAAAGCC GCACCAATGG CATATATTGT GCATACCGCC
GGGGGGAAAG CAATCGACGG TAGAAGCGGC TCTCTCCTAG AAGTGCGACC TGATAGGGTG
CACCAAAAGT CTCCTTGTTT CATTGGTAGC TACGATGATG TCTCGGAATG GGAAAGCTAT
CTCAGCGACA ATGAAGGCAT TTATTATAAG AAAGGCAGAG ACTAG
 
Protein sequence
MGRGVIIFCV KNFAVWLLII TSAVSIQAWI PLPLSATVKA RIDSTTLFFS RYKTPLYHGG 
NEESYGPPAP AVDSRYYTYV EAPVQSSRSR DTKQPITLSR FLSDAVKENA ELRDLESLFM
GIQMACKTIA SLVNRAGLVY SITEDIRDDI TDGRFYSMKR LDHLSTVVLK NALKYTGKCE
VLAPKSRLDN ESPAQHQPGV LIAKSMDSNY VACLDPLDGS GNADASICTG TVFGVFEKET
STGISLWKKS REDRDRELVD SVLQPGKNMR AAGYCLYSSA TVLVFTLGES VQGFTLDPQM
QEFVLTHPDL TIPKRGSVYS CNEANSEGWD DAYNSYLRNL KTGKGETGKR YAHRYVGSMV
GDIHRTLLYG GIFAYPADRL EHPDGNLQLL YKAAPMAYIV HTAGGKAIDG RSGSLLEVRP
DRVHQKSPCF IGSYDDVSEW ESYLSDNEGI YYKKGRD