| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54217 |
|---|
| Symbol | |
|---|
| ID | 7197953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011672 |
|---|
| Strand | - |
|---|
| Start bp | 108227 |
|---|
| End bp | 109289 |
|---|
| Gene Length | 1063 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178431 |
|---|
| Protein GI | 219115271 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGGCTGTCCA CACAGTAGGA ACAAAGCACA CCCTTCCCGT ACTCGTCGCC AAACGATTCG
ACGGGACCAT TGATCTGCGT ATGTACTAGC TTCTCTTTGC GATGCAAGCT TCGAAGCGCG
TCCGTTTCCC GGACGATGAT CAGCATGGTC CCTTGTCAAT ACTGCTTTGC ACGGTACCAC
ACCGGGAAGA TTTTAGCAAG GAGGAGCAAG AGAACCTGTA CTTTTCGAGA GGGGACTACC
ACATGAGTAG ATCGGCCGCC AAGGTCGTTA GTAAAGAGAG TGAGCGACTC GGCTACAGCA
AAACACTTCG TGCAGTGTTT CAGGAAAAGA GCAAGGAAGC GCAGGACTCT TTAAACCTGT
GGGCGGCTAG CGGTCACAGC CGGAGAGGTC TGGAACGGTG GGCAAATAAG GAACACGGGG
AAATTCGACA GCGGGAACAA TTTAACGCCG TAATGGCGGT ATTGCGCGCG CAGGATGACA
TGCTGTGCAA CAAAGGGCAG GTGAGCGGCG AGGCGTTACG GAAAGTATCG TACAAAGCTA
CGAAAACGTC GCGACATTTC GCACGGATGA TGGGTAAGGC GGACTCGTAT GCAGTCGCTG
CTACACTGAA GGGTTCCGAC GACGGCTCGT TAGCCACCGC GATCACATTT CTGACCATGC
AAAGCGAAGA AGATAATGTC TCGAAACGAA GTCTTTCGTG GGACGATCAG TCGGTGGATG
TGACAATAAC TGGTGGGGAT GAATTGAAAG ATAGTTGTCA CGGTGACCGA CGCTCTGGAA
GCCGTTTAAG GCGCTTTGGT TTTGGTCGAA AACAACGAGA GCCCAAAGTT CCTGCCACCG
AGCCTCGCGT TTCGCGAGTC GCCTAGACTT CCCAAGAGGC TGGGCTGTTT TCCGACCGGA
ATTTCCTTTC GTTCCGTTGT CTCTCTTGTA AAATATAGTT CACTAGCTTG CGTAACCTAT
GTAGGTACGT CTGTATTTAT CCATTTTCCG GCAGGGAAAC TGCCACCAAT AGATGGTTGT
TCGAGATCAT TTTTTTCGTC TAGTAAACGT TGCCAATTCT TCG
|
|---|
| Protein sequence | MQASKRVRFP DDDQHGPLSI LLCTVPHRED FSKEEQENLY FSRGDYHMSR SAAKVVSKES
ERLGYSKTLR AVFQEKSKEA QDSLNLWAAS GHSRRGLERW ANKEHGEIRQ REQFNAVMAV
LRAQDDMLCN KGQVSGEALR KVSYKATKTS RHFARMMGKA DSYAVAATLK GSDDGSLATA
ITFLTMQSEE DNVSKRSLSW DDQSVDVTIT GGDELKDSCH GDRRSGSRLR RFGFGRKQRE
PKVPATEPRV SRVA
|
|---|
| |