| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54105 |
|---|
| Symbol | |
|---|
| ID | 7197583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | + |
|---|
| Start bp | 801047 |
|---|
| End bp | 802071 |
|---|
| Gene Length | 1025 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177690 |
|---|
| Protein GI | 219111877 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGCTCCGACA TTACACCATG GCACAAGTGG AAAGCATCAT TAGCACCAAC AACGATTCCA
GCTCGGAGGA CGCCGAGATG AAGGCGCTCA TGGCCAAGTG GGATGCGGAA AACGGTACGG
CGATCGACGA CGACGTGGAC GAGGAACTCG ACGATGACCC GTTGGATTAC GACGAGGCGC
TCGAAAAGTA TCGTCGGGTT CTCTTTGCCG ACAGCAACGC CATTGATCAC ATATTTTTGG
GTACGTCCGA TTTCGATCAA GCCATGACCG ATTTCACCCA GCTGACCGGC ATCGAACCCG
TCATGGTGGT GTCCTTGAAC GGTCTCGGTA CCAAGTCGGC CCGTGTGGGT TTCAACGAAT
GCTGTTTTCT AGAAATTGTC GGCCCCGACC CGAAACAAGC GGACACCCCC ATGAAACACA
AGCTGAGTGG CATCGAGGCT GGCAAGCTCG TGCCCCTCCA CTACGCCGTT CGTCACGACG
AGACCATGAA AACGATAAAG TCCGAGACTC TACCCAATCT TGGGTACGGC TTCGACCAGA
TCACGATGGT CGCTAAAGAC AGGGGCATGC CCTGGCAATG GGACATGGTT ATTTTGGAAG
ACCATTCTGA CGGAGGTTTG GCCCCGATTT ATTGTCACTG GGGTAAATCG ACGCACGGAG
CGAGCAAACT GCCACAAGTA GGTCGGTTGG TGTCCGTCAA GGTGCGTGTG CGGGACGCCC
AGAGTCCCAT CCTCCAACTA CTGTCGAAGG TGGACGGTGT GGATGCGGGC GCCGCCGAGG
GAGGACAGGA TATGTTGGCG TTCACCTTTA CGAGCGAAAA GGGTACGCAC ACGTTTTCGA
CGTCGAGCCC GATTGGTATT GCGTTTCCCA AAGAAGGCGG ATTGCCGGTC AAACACGCAT
TTTAGTCAGT GTGAGGTTGT GGCCGACTAC CAATTTGTAC CCCACGTCAA CGGTTACCTG
TGGGGCATTC GCTCCAAAAT GAGTGATACT ATCTACTTTT TACGTTATAT AAATCAATAT
TGACC
|
|---|
| Protein sequence | MAQVESIIST NNDSSSEDAE MKALMAKWDA ENGTAIDDDV DEELDDDPLD YDEALEKYRR
VLFADSNAID HIFLGTSDFD QAMTDFTQLT GIEPVMVVSL NGLGTKSARV GFNECCFLEI
VGPDPKQADT PMKHKLSGIE AGKLVPLHYA VRHDETMKTI KSETLPNLGY GFDQITMVAK
DRGMPWQWDM VILEDHSDGG LAPIYCHWGK STHGASKLPQ VGRLVSVKVR VRDAQSPILQ
LLSKVDGVDA GAAEGGQDML AFTFTSEKGT HTFSTSSPIG IAFPKEGGLP VKHAF
|
|---|
| |