Gene PHATRDRAFT_52648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_52648 
SymbolFABB 
ID7198787 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand
Start bp135548 
End bp136996 
Gene Length1449 bp 
Protein Length427 aa 
Translation table 
GC content54% 
IMG OID 
Product3-oxoacyl-[acyl-carrier-protein] synthase 
Protein accessionXP_002184832 
Protein GI219129305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0664746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAGG CCACCAGTCC GGGCCTACGT CGTGTTGTCG TCACCGGAAT GGGTATCACG 
TCCTGTTTGG GTAACACCTT GGAAGAAGTT ACCGACAGTT TGAAGAACGC CAAGTGTGGG
ATAACCTTTG CGGAACAGTG CGCCGAGCTC GGTATCAAAT CCCAAGTCCG CGGCATTCCC
AACCTCACCG ACGAAGACAT CAAGGCCCTC ATTCCCAAAT CCGCGCTCCG TTTTTGCGGA
ATCAATGCTC AGTACGCCTA CATCGCCATG GACCGGGCCA TTCAAGATTC CGGTATGGCC
GACGACGTTT ATCAAGAAAA CCCACGGGTG GCCGCCATTA TCGGACAGGG TGGGACCTCC
ATTCCCGATA TCGTGGAAAC CGTTGAAGCC GTGCAGGGCG GTAACAAGCG GTGGAAGAAC
AAGGTGGGAC CCTTTCGAGT CACCCGCTCG ATGGGGTCAA CCTGCTCCGC AGTGCTAGCC
ACCAACTTTA AAGTGCAAGG CCCGTCCTTC AGCATCTCCT CCGCCTGCTC CACTGGAGCA
CACTGTATTG GGACTGGATT TGAACAAATT CAACTGGGCA AGTCAGATAT CGCCTTTTGT
GGAGCCGGTA CGTAATCAAG TAGTAATGAC GACATTATCC TCGTCGTCTG CGAATCGTGA
TTGTGGAGGT TGGAATGGCT CAAACGACAT CGGAGACTCG TTGGTGTCAT TTTCTTTCGA
GCTCACACAT GCGCTGCCAC GTTGTGCCTT TCCTTCTTTT CCGGACGAAT AGGTGAAAGC
GTCAATTGGG AAGTCACCAG TATGTTCGAT TGCATGGGTG CTCTCAGCAC AAGCTACAAC
GAAACGCCCG AAAAGGCCTC CCGTGCCTTC GACAAGAACC GCGACGGTTT CGTCATTGCC
GGAGGAGGTG GTATTCTTGT CTTGGAAGAG CTGGAGCACG CCAAGGCCCG TGGAGCCAAG
ATTTACGCCG AATTGACGGG ATACGCAGCC AACTCGGACG GCTACGATAT GGTCGCTCCC
TCTGGTGTTG GTGGACAGCG CTGCATGGAC CTCGCGATGG CCGACGCTGC CCGCAACTCG
GGCAAGGATA GTCCTGTGGA ATACATCAAT ACGCACGGAA CCAGTACTCC CGTGGGCGAT
GTCATGGAAT TGGGTGCTAT TAAGACTTTG TTCACCGAAA AGGGATACCA ACCGCAAGTC
GGTTCCACTA AGTCTTTGTC CGGACACGCT CTCGGTGCAG CGGGTGTGCA CGAAGCGATC
TATACCATTC TCATGATGAA CAACGATTTT ATGGCCGAAA GCGCCAACAT CGAGGACTTA
GTCGACGAAG CCGAGGGCAT GAACATTCTG ACCAAACGTA AGGACGGTCC CTTCCATCGA
GCCATGTCCA ACAGTTTCGG CTTTGGTGGA ACCAACTGTG CCTTGGTATT CGACAAGTAC
GAAGAGTAG
 
Protein sequence
MAEATSPGLR RVVVTGMGIT SCLGNTLEEV TDSLKNAKCG ITFAEQCAEL GIKSQVRGIP 
NLTDEDIKAL IPKSALRFCG INAQYAYIAM DRAIQDSGMA DDVYQENPRV AAIIGQGGTS
IPDIVETVEA VQGGNKRWKN KVGPFRVTRS MGSTCSAVLA TNFKVQGPSF SISSACSTGA
HCIGTGFEQI QLGKSDIAFC GAGESVNWEV TSMFDCMGAL STSYNETPEK ASRAFDKNRD
GFVIAGGGGI LVLEELEHAK ARGAKIYAEL TGYAANSDGY DMVAPSGVGG QRCMDLAMAD
AARNSGKDSP VEYINTHGTS TPVGDVMELG AIKTLFTEKG YQPQVGSTKS LSGHALGAAG
VHEAIYTILM MNNDFMAESA NIEDLVDEAE GMNILTKRKD GPFHRAMSNS FGFGGTNCAL
VFDKYEE