Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_52648 |
Symbol | FABB |
ID | 7198787 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011694 |
Strand | + |
Start bp | 135548 |
End bp | 136996 |
Gene Length | 1449 bp |
Protein Length | 427 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | 3-oxoacyl-[acyl-carrier-protein] synthase |
Protein accession | XP_002184832 |
Protein GI | 219129305 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0664746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAGG CCACCAGTCC GGGCCTACGT CGTGTTGTCG TCACCGGAAT GGGTATCACG TCCTGTTTGG GTAACACCTT GGAAGAAGTT ACCGACAGTT TGAAGAACGC CAAGTGTGGG ATAACCTTTG CGGAACAGTG CGCCGAGCTC GGTATCAAAT CCCAAGTCCG CGGCATTCCC AACCTCACCG ACGAAGACAT CAAGGCCCTC ATTCCCAAAT CCGCGCTCCG TTTTTGCGGA ATCAATGCTC AGTACGCCTA CATCGCCATG GACCGGGCCA TTCAAGATTC CGGTATGGCC GACGACGTTT ATCAAGAAAA CCCACGGGTG GCCGCCATTA TCGGACAGGG TGGGACCTCC ATTCCCGATA TCGTGGAAAC CGTTGAAGCC GTGCAGGGCG GTAACAAGCG GTGGAAGAAC AAGGTGGGAC CCTTTCGAGT CACCCGCTCG ATGGGGTCAA CCTGCTCCGC AGTGCTAGCC ACCAACTTTA AAGTGCAAGG CCCGTCCTTC AGCATCTCCT CCGCCTGCTC CACTGGAGCA CACTGTATTG GGACTGGATT TGAACAAATT CAACTGGGCA AGTCAGATAT CGCCTTTTGT GGAGCCGGTA CGTAATCAAG TAGTAATGAC GACATTATCC TCGTCGTCTG CGAATCGTGA TTGTGGAGGT TGGAATGGCT CAAACGACAT CGGAGACTCG TTGGTGTCAT TTTCTTTCGA GCTCACACAT GCGCTGCCAC GTTGTGCCTT TCCTTCTTTT CCGGACGAAT AGGTGAAAGC GTCAATTGGG AAGTCACCAG TATGTTCGAT TGCATGGGTG CTCTCAGCAC AAGCTACAAC GAAACGCCCG AAAAGGCCTC CCGTGCCTTC GACAAGAACC GCGACGGTTT CGTCATTGCC GGAGGAGGTG GTATTCTTGT CTTGGAAGAG CTGGAGCACG CCAAGGCCCG TGGAGCCAAG ATTTACGCCG AATTGACGGG ATACGCAGCC AACTCGGACG GCTACGATAT GGTCGCTCCC TCTGGTGTTG GTGGACAGCG CTGCATGGAC CTCGCGATGG CCGACGCTGC CCGCAACTCG GGCAAGGATA GTCCTGTGGA ATACATCAAT ACGCACGGAA CCAGTACTCC CGTGGGCGAT GTCATGGAAT TGGGTGCTAT TAAGACTTTG TTCACCGAAA AGGGATACCA ACCGCAAGTC GGTTCCACTA AGTCTTTGTC CGGACACGCT CTCGGTGCAG CGGGTGTGCA CGAAGCGATC TATACCATTC TCATGATGAA CAACGATTTT ATGGCCGAAA GCGCCAACAT CGAGGACTTA GTCGACGAAG CCGAGGGCAT GAACATTCTG ACCAAACGTA AGGACGGTCC CTTCCATCGA GCCATGTCCA ACAGTTTCGG CTTTGGTGGA ACCAACTGTG CCTTGGTATT CGACAAGTAC GAAGAGTAG
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Protein sequence | MAEATSPGLR RVVVTGMGIT SCLGNTLEEV TDSLKNAKCG ITFAEQCAEL GIKSQVRGIP NLTDEDIKAL IPKSALRFCG INAQYAYIAM DRAIQDSGMA DDVYQENPRV AAIIGQGGTS IPDIVETVEA VQGGNKRWKN KVGPFRVTRS MGSTCSAVLA TNFKVQGPSF SISSACSTGA HCIGTGFEQI QLGKSDIAFC GAGESVNWEV TSMFDCMGAL STSYNETPEK ASRAFDKNRD GFVIAGGGGI LVLEELEHAK ARGAKIYAEL TGYAANSDGY DMVAPSGVGG QRCMDLAMAD AARNSGKDSP VEYINTHGTS TPVGDVMELG AIKTLFTEKG YQPQVGSTKS LSGHALGAAG VHEAIYTILM MNNDFMAESA NIEDLVDEAE GMNILTKRKD GPFHRAMSNS FGFGGTNCAL VFDKYEE
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