Gene PHATRDRAFT_52260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_52260 
Symbol 
ID7202818 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp267234 
End bp267682 
Gene Length449 bp 
Protein Length107 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181875 
Protein GI219123113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCTTCGGTAA CGTTTGTTGT ATCTCAGGGA CAGCATGATA TCCGTATAGT CCCATTGGAT 
GGCGTGCAAA TGAACCGATC CAATAACGTA CCCAGTGGCA CATGTGTTAC CGACTCCCGT
GCTATTTCGA TGAGCAGTCT TAATGCAGTA GAGATGAATT CACAGTCTGG AATGTCTCAG
CCGGAAAGCA CTGTTGAGAA TACGATGGAC TTCTTGCTTG TTCCCCAAGG AGGCCTAAAG
GTATGTGTAC TTAAATTATC AAAGATTCCG AAGTCCTGTA CCTAAATGCC CAGTGTCTTT
CGCAGGGAAC GTCCAGGCCT GTATACTACA GATGTCTTCT AAACGAGACA AAGCTTACCC
GATCACTCTT AAAGAATCTC ACGTACCAGT TTAGTTTTCA ATACGGGACT GCCACAAAGT
CTGTACGCAA TGTTCCGGTG CTTCAGTAT
 
Protein sequence
PSVTFVVSQG QHDIRIVPLD GVQMNRSNNV PSGTCVTDSR AISMSNSEVL YLNAQCLSQG 
TSRPVYYRCL LNETKLTRSL LKNLTYQFSF QYGTATKSVR NVPVLQY