| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_51952 |
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| Symbol | CPD3 |
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| ID | 7201113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011676 |
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| Strand | + |
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| Start bp | 553266 |
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| End bp | 554799 |
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| Gene Length | 1534 bp |
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| Protein Length | 511 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | class II CPD photolyase |
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| Protein accession | XP_002180071 |
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| Protein GI | 219118604 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGCAA ACCGTACACG AGTCCTTACT TCGGAAGGAA CCGAGCCAAA AGAGGGACAA
TCGGTAGTGT ACTGGATGCA ACGTGACGTG CGATCGGTCG ATAATTGGGC TCTCTTATGG
GCTCGAGATC TAGCGATGCA GCACGATGTT CCCCTACACG TCGTGTACGC GTTGCCACCA
CCGGCTTCGT CGGACGGATC AGACAACGAT AGAGATTTGC CTCCAGCTCT CATTCAATTA
CCCATGACGA AGCGACATGG CGCCTTTTTG CTGGGTGGGC TAGAATGCGT GTACAAGGAG
TTGAAAGAGA TGAAGATTCC GTTGTACGTC TGCCTTCCCG ACTCTCACGA GAAGGTTGGC
GAGACTGTCT GCGAAGCAAT CCTGCATAAA TACAAGGCAA AAATTGTTGT CTCTGATTTT
TCTCCGATAC GCGAATACCG TCAATGGATG GAACTCCAGG CCGTACCTAT CTTGGAGGAA
GCGAAGGTCC CGTTTTATCA GGTTGATGCC CACAACATTG TGCCGGTGTG GACGGCAACC
GACAAACGAC AAGTTGGAGC TCGAACCCTA CGGCCGCGAA TTCATAAAGT GTATAATGAC
TACCTACAAG ACTATCCGGA TCTCAAAGGC AACAGCCATT CGGTTGACCA ACCCAAGTTT
GACCGGGTCG AATACGAATC GTTTTTACAG ATGGACGAAT CGGTGGAATC CGTCGACTGG
GCACAGCCTG GAACAGAAGC AGGTATGAAA CAGTTTGAAT TTTTTAGCAA GAATGGCCTA
AAGATTTTTC ATGAGCAACG TAATGATCCC GTGCAAAAGC ACGTCTGCTC TGACATGTCC
CCCTGGATCA ATCACGGCCA TATTTCGTTT CAACGGTTGG CCCTAAATGT CAAAGCATTG
AACAAACACG CCAACGGAGC TGCAGCCTTT ATTGAAGAAG GCGTTATTCG TCGCGAGCTA
TCAGACAACA TGTTGTACTA TTCTCCGAAC GACTACGACT CGCTCGAAAC GGCAGCTGGC
TGGGCACGGG AGAGCCTGCA ACTGCACGCG TCCGACGAAC GTGAATTCGT GTACTCACTC
TCCGAGCTGG AGGAAGGACG CACTCACGAT GATTTGTGGA ATGCAGCTCA GTTGCAGATG
GTACGAGATG GAAAAATGCA CGGCTTTATG CGCATGTACT GGGCCAAAAA AATCCTCGAG
TGGTCCGAAT CTCCGGTTGG GGCGTTGCGG ACGGCGCAAT ACCTGAATGA CAAGTACGAA
TTGGACGGCC GCGATCCAAA CGGCTTTGTC GGGGTCGGCT GGTCCATAAT GGGAATCCAT
GATCAAGGAT GGAAGGAACG AGAAGTGTTT GGTAAAATTC GGTACATGAA CTACAACGGG
TGTAAGCGTA AATTCAAAGT GGAGGAGTAT GTTGCTCAGT ACAAAGGTGC CGCCGAGAAT
GCTGCCAATG CAGTGGAGGA AACAAATGGG TCGTCCAACA AGCGCAAATC GTTACCAAGC
TCTTCAAATT CGAAACAAAA GACTGCCAGA AAGT
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| Protein sequence | MLANRTRVLT SEGTEPKEGQ SVVYWMQRDV RSVDNWALLW ARDLAMQHDV PLHVVYALPP
PASSDGSDND RDLPPALIQL PMTKRHGAFL LGGLECVYKE LKEMKIPLYV CLPDSHEKVG
ETVCEAILHK YKAKIVVSDF SPIREYRQWM ELQAVPILEE AKVPFYQVDA HNIVPVWTAT
DKRQVGARTL RPRIHKVYND YLQDYPDLKG NSHSVDQPKF DRVEYESFLQ MDESVESVDW
AQPGTEAGMK QFEFFSKNGL KIFHEQRNDP VQKHVCSDMS PWINHGHISF QRLALNVKAL
NKHANGAAAF IEEGVIRREL SDNMLYYSPN DYDSLETAAG WARESLQLHA SDEREFVYSL
SELEEGRTHD DLWNAAQLQM VRDGKMHGFM RMYWAKKILE WSESPVGALR TAQYLNDKYE
LDGRDPNGFV GVGWSIMGIH DQGWKEREVF GKIRYMNYNG CKRKFKVEEY VAQYKGAAEN
AANAVEETNG SSNKRKSLPS SSNSKQKTAR K
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