Gene PHATRDRAFT_50886 details

Gene Information

• Locus tag: PHATRDRAFT_50886
• ID: 7200501
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: +
• Start bp: 78640
• End bp: 79418
• Gene Length: 779 bp
• Protein Length: 145 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002179574
• Protein GI: 219117562

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGGTTCCTCT CTCTCGTTTG CGGGTGTTTG TAATCGATAG AATTTTTCGC ATCGAATCTG 
AACAAAATCA ACATGTCGGG GTACGTTGGA AGAGCGTCGT CGTGCGTTTA CTGAGGACAG 
AATGAAGCGT AGGAGTAGGA AGGAATGAAT AATTTCGAGA ATGGAATGTT TGGTGCTCTT 
CCTCGTGGCA TCCTTTTTTA GATGCGGTTT CGAGGAAGCT CTTCCTTCTT TATTATCATC 
GCTGATGCTT TCCGTGACGT TTCTAACAAG CACATTTGTC ATTTCTTTTT TATTGATATT 
TGCAGTGAAG AGCCAACACA AACGATGGGC GGCGTCAAGC TGCAAGAAGG CGAGGAAGTA 
TTCGGCGTGG CGCACTTGTT CGCTTCGTTC AACGACACCT TTGTGCACGT GACGGATTTG 
TCCGGACGTG AAACACTGGT GCGTGTGACG GGAGGCATGA AAGTCAAGGC GGATCGGGAC 
GAATCCAGCC CGTACGCTGC CATGTTGGCC GCACAGGACG TTGCCGTCCG GTGCAAGGAA 
CTGGGCATCA CCGCGTTGCA CATCAAAGTC CGGGGTACCG GAGGGAACAA ATCGAAGAGC 
CCCGGACCCG GTGCACAGTC GGCACTCCGT GCCTTGGCGC GAAACGGAAT GAAGATTGGA 
CGTATTGAGG ATGTGACGCC CATTCCCAGT GACTCGACTC GTCGTAAGAG TGGACGTCGT 
GGTCGCCGTT TGTAAAGACC TACTACTATT ACAATTAAAA AAAAACACTT ATTTGCCCC 

 

Protein sequence

MSGEEPTQTM GGVKLQEGEE VFGVAHLFAS FNDTFVHVTD LSGRETLVRV TGGMKVKADR 
DESSPYAAML AAQDVAVRCK ELGITALHIK VRGTGGNKSK SPGPGAQSAL RALARNGMKI 
GRIEDVTPIP SDSTRRKSGR RGRRL