Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50616 |
Symbol | |
ID | 7199449 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011700 |
Strand | - |
Start bp | 98575 |
End bp | 101751 |
Gene Length | 3177 bp |
Protein Length | 1015 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185584 |
Protein GI | 219130885 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00719688 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATTC CAACGATTCT CACCGTGGAA GAACCAGAAC GGGATCTGTA CGGCCGCGTG AAGGAAAAAG CCGCAATCTC CGTCGCTAAC GATCAGTGCA TGGATTTGGC CACAGCAATG CGAGGAAGCG AGAAGTCTCA CGTAATTCTC GTACATGGTC CATCAGGTTT GGGCAAAACT GCTTTGTTAC AGCACGTCTT CGAGGAACGG ATAAGGCAAG AGGGCGGCTT CTTCATATAC GGAAAGTTCG ACTCAGTCCC GTCGGCGAGC CCTGGCCAGC CATTGTGGAC GCTTTCAGCG ATTTGTGTGT ACAGTGTCTT GCTTCCGAAA GACGATCGAA AATACGGAAG GCGCTTTGCG AGGAACTAGA ATCAGACGTC AATCAACTTT CACATTTAAT TCCCAACTTC AAGGCGCTCG TTGACGGCTT TCTTGAATCG GATGACGACA CTGAGGGAAA TGGAGATTGG AATGACATCC GAGCATCATT CAGGCGAAAC GAATTTGGGT TTACCCGCAT AAAACTCCTC TTTCAACGAT TCCTCAGAGC AATTTGTCAC CCCATCTCCT CCCGAATAGT TTTGTTGCTT GACGACGTGC AATGGGCAGA CCAATTGAGT TTGCTTCTGA TAGAGGCGCT CTTATCCGAA GGCGAGCCTG TAAGCGGGTT TCTGTTAGCT ATCACATCTG ATGAACCAGG ACTTTTTCGA CGAGCTCAGG TCAATAGAGA TCTCGTAAAT GCTACCAAAA TTCGTATTCG CAACCTTTCC AAGAATGATT GGATCGAGAT GACAAAGCAA ACCTTGAAGA AAGCGAAAAG CTACATTGCA GCCGAAGAAT TGGATATTCT CTTCAAAAAG ACTATGGGCA ACCCTTTCTT GACCGTTCTT TGTGTAAAGG CAATAGACGA GGGAGGCTTG CTTAAGGAAT TAGAAATTGA AGCTGACAAC GGTGTAAAAG CTGGAATTTT GTCAGTGATT AAGGGCCGCC TGAGCCGATT GGCAAAGCCA GCTCAAGATG CTTTGTTTTT GGGAGCCTGC TTTGGACTGA GGTTTTGCAT GGATTGGGTG GCTCCTCTTG TCCCGACATA TGGATCAACA CGAAACGCTT CTCTGCAACC GGACGTCATG CCTTTAAATT GGGGCTCGGG ACGTTTGGAC GACTCAGAGC ATTTGTCTGA AAGTGAACTC AAGGAGACAT TGAACGAAGC TATCGTTAAC GGCCTGGTCA CTAAACGATG CGGTATCCCT TGGTACGAAT TCACTCATCA TTCTATCCGC GATGCGGCCT ATGACCTTTT CAGGAATAGT TCGTGTAAGA GAGAACGAAT ACATTTGCTA ATAGGCGAAC ACACGCTTCG AAAGGTGAGG TTTTCCTCTA GCTCCGAGGA CGATACTATT CTATGGACAG CAGTGGATCA TCTGAATCTA GGTTCTTCTC AGCTGCATGA GGAGCGCAAG TTGATTGAAC TTGCTCGTCT CAATGGAAGG GCAGCAGAAA AATCAATGCT AAAGTTAGCG TTCTTCTCGG CTGCCCAGTA TGCGTCAGCT GGTTTGGAAA AGATAGGACG AGTTGGAGGA TGGCAAACAG ACTTTGCTGT GACCTGGGAG TTGAGCACGC ATTTATGTCG AATGTACAGT TGCCTCGGTG AGCATGAAGC TTGTAAGAGA GTCGCCAACG ATGTGGTGTC CCGCAGTTCG TCCATTTTTG AAAAGCTTGG TGCTTTCGAA GCTGTCATGG AGTCTTCTCG AGTTGAAGGG AATGTAGAGG AAGCATTCAA CATAGGGTTT GACGTCCTCA GAAGCTTGAA TGAACCTTTT CCCAACAGAG TTAGCAAAGC GCTTTTAATT TGGGAAATTG TCAAGACAAA ACGTATCTTG ACCCGGAAAA CATTAAAGGA TTTGTCAGGC CTACCAAAAA TGGCTGACGA AAGAGCATGT GCTACGGTTC GGTTTCTAAA ATTACTATCC CTCACCTTCT TTGCCATGGG AAACTATTTC AGCTACTTTG TGGCATCGTT GAGAATCGTC AGACTGAGCA CAAAGTACGG TGTTGCTCGG GAATCTCCAA AAGCATTTGT GGTCTTTGGG AATATTCTAT CCCAAACAAG TCGACACTTC AACGAAGCTA GCCGATACAT GTCCGTTGCG CTGTCTTTAG GTGAAAAGGC GGGCAAATCT GGAAGAGCGC AATCTCTTGC CGTTGGAAGT TGGATCTTGA CGCCTTTGCA AGGCACCGTC TCGGAAGCAG TTGGTCAAGC TCTGTATGGA TATCGGCTCG CAATGGAGTG TGGCGAGGTT GTGTGCGCGT GTACCTCAGT TCTTTCTTAT TGTGGCCTCT ATTTTTGGAG TGGACTTCCT ATACCACCCC TAATGAAAGA TCTTCCAACT TTCCTGACCA TGCTAAGCGA ATATAAGCAG GTACGGCATT TCAAATTCTA GCTCTGCATG GGCATCCGAC TGTTTTCTCA CCCTTTTCTT TCAGACCGTG CACGAAGTAG GACTCTCCTC ACTGATGTAT TTCATTCAGA CATCAACAGC GGAGACCAAT CCGACTGATT TATATGACGA TACCGTATGG ATGGTCAGAT GTCAGAATGC AGGAGCCGCT ATTCAAGTCA ATACCATTTG TCTATACCGC ATAATATATG CTTATTACAT GCAAGATCTC AGTTCAATAC GAGCTTCTCA ACTAGATGCG CACCGAGCTG TAAAGGTACA ATTGTCAAGA ACTTTGCAAG TTGTCGTGTG CTGGCTTTTT GTGGGGCTCT CCGATTTCTT CTTAGCACAG TCTGGGTGTG GCATTGAGTT TCAACGAAGT GGCCAAAAGA TTTTACGCAT GATGCGTCGG TTGGTCGTCA AAGGGGACAG CAAATGCGAG CATATGTTCA TGTTCCTCAG GGCAGAAAAG TACAAACTTG TATCAAAACA GAGCAATGAA GTTCTAAAAT CCTACGACGA GGCCATTTCT GGAGCCGGAC AGGCTGGATT TTTCAACCAT GCGGCCTTGG CGAACGAGCG CGCCGCACTA TACTGTTTAG CGCGTGGAAA GGAAAAGAAA GCGGCTCAAT ATTTCCAAGA AGCCTGGCAA GGGTACCTGA ACTGGGGAGC CCATTCTAAA GTTGACCAGC TTGGGGGGTG GTACTCAGCA TACATACAAC AAAGTTCTAG AAAATAG
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Protein sequence | MAIPTILTVE EPERDLYGRV KEKAAISVAN DQCMDLATAM RGSEKSHVIL VHARLRGTDK ARGRLLHIRK VRLSPVGEPW PAIVDAFSDL CVQCLASERR SKIRKALCEE LESDVNQLSH LIPNFKALVD GFLESDDDTE GNGDWNDIRA SFRRNEFGFT RIKLLFQRFL RAICHPISSR IVLLLDDVQW ADQLSLLLIE ALLSEGEPVS GFLLAITSDE PGLFRRAQVN RDLVNATKIR IRNLSKNDWI EMTKQTLKKA KSYIAAEELD ILFKKTMGNP FLTVLCVKAI DEGGLLKELE IEADNGVKAG ILSVIKGRLS RLAKPAQDAL FLGACFGLRF CMDWVAPLVP TYGSTRNASL QPDVMPLNWG SGRLDDSEHL SESELKETLN EAIVNGLVTK RCGIPWYEFT HHSIRDAAYD LFRNSSCEHT LRKVRFSSSS EDDTILWTAV DHLNLGSSQL HEERKLIELA RLNGRAAEKS MLKLAFFSAA QYASAGLEKI GRVGGWQTDF AVTWELSTHL CRMYSCLGEH EACKRVANDV VSRSSSIFEK LGAFEAVMES SRVEGNVEEA FNIGFDVLRS LNEPFPNRVS KALLIWEIVK TKRILTRKTL KDLSGLPKMA DERACATVRF LKLLSLTFFA MGNYFSYFVA SLRIVRLSTK YGVARESPKA FVVFGNILSQ TSRHFNEASR YMSVALSLGE KAGKSGRAQS LAVGSWILTP LQGTVSEAVG QALYGYRLAM ECGEVVCACT SVLSYCGLYF WSGLPIPPLM KDLPTFLTML SEYKQTVHEV GLSSLMYFIQ TSTAETNPTD LYDDTVWMVR CQNAGAAIQV NTICLYRIIY AYYMQDLSSI RASQLDAHRA VKVQLSRTLQ VVVCWLFVGL SDFFLAQSGC GIEFQRSGQK ILRMMRRLVV KGDSKCEHMF MFLRAEKYKL VSKQSNEVLK SYDEAISGAG QAGFFNHAAL ANERAALYCL ARGKEKKAAQ YFQEAWQGYL NWGAHSKVDQ LGGWYSAYIQ QSSRK
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