| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50616 |
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| Symbol | |
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| ID | 7199449 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011700 |
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| Strand | - |
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| Start bp | 98575 |
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| End bp | 101751 |
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| Gene Length | 3177 bp |
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| Protein Length | 1015 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185584 |
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| Protein GI | 219130885 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00719688 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATTC CAACGATTCT CACCGTGGAA GAACCAGAAC GGGATCTGTA CGGCCGCGTG
AAGGAAAAAG CCGCAATCTC CGTCGCTAAC GATCAGTGCA TGGATTTGGC CACAGCAATG
CGAGGAAGCG AGAAGTCTCA CGTAATTCTC GTACATGGTC CATCAGGTTT GGGCAAAACT
GCTTTGTTAC AGCACGTCTT CGAGGAACGG ATAAGGCAAG AGGGCGGCTT CTTCATATAC
GGAAAGTTCG ACTCAGTCCC GTCGGCGAGC CCTGGCCAGC CATTGTGGAC GCTTTCAGCG
ATTTGTGTGT ACAGTGTCTT GCTTCCGAAA GACGATCGAA AATACGGAAG GCGCTTTGCG
AGGAACTAGA ATCAGACGTC AATCAACTTT CACATTTAAT TCCCAACTTC AAGGCGCTCG
TTGACGGCTT TCTTGAATCG GATGACGACA CTGAGGGAAA TGGAGATTGG AATGACATCC
GAGCATCATT CAGGCGAAAC GAATTTGGGT TTACCCGCAT AAAACTCCTC TTTCAACGAT
TCCTCAGAGC AATTTGTCAC CCCATCTCCT CCCGAATAGT TTTGTTGCTT GACGACGTGC
AATGGGCAGA CCAATTGAGT TTGCTTCTGA TAGAGGCGCT CTTATCCGAA GGCGAGCCTG
TAAGCGGGTT TCTGTTAGCT ATCACATCTG ATGAACCAGG ACTTTTTCGA CGAGCTCAGG
TCAATAGAGA TCTCGTAAAT GCTACCAAAA TTCGTATTCG CAACCTTTCC AAGAATGATT
GGATCGAGAT GACAAAGCAA ACCTTGAAGA AAGCGAAAAG CTACATTGCA GCCGAAGAAT
TGGATATTCT CTTCAAAAAG ACTATGGGCA ACCCTTTCTT GACCGTTCTT TGTGTAAAGG
CAATAGACGA GGGAGGCTTG CTTAAGGAAT TAGAAATTGA AGCTGACAAC GGTGTAAAAG
CTGGAATTTT GTCAGTGATT AAGGGCCGCC TGAGCCGATT GGCAAAGCCA GCTCAAGATG
CTTTGTTTTT GGGAGCCTGC TTTGGACTGA GGTTTTGCAT GGATTGGGTG GCTCCTCTTG
TCCCGACATA TGGATCAACA CGAAACGCTT CTCTGCAACC GGACGTCATG CCTTTAAATT
GGGGCTCGGG ACGTTTGGAC GACTCAGAGC ATTTGTCTGA AAGTGAACTC AAGGAGACAT
TGAACGAAGC TATCGTTAAC GGCCTGGTCA CTAAACGATG CGGTATCCCT TGGTACGAAT
TCACTCATCA TTCTATCCGC GATGCGGCCT ATGACCTTTT CAGGAATAGT TCGTGTAAGA
GAGAACGAAT ACATTTGCTA ATAGGCGAAC ACACGCTTCG AAAGGTGAGG TTTTCCTCTA
GCTCCGAGGA CGATACTATT CTATGGACAG CAGTGGATCA TCTGAATCTA GGTTCTTCTC
AGCTGCATGA GGAGCGCAAG TTGATTGAAC TTGCTCGTCT CAATGGAAGG GCAGCAGAAA
AATCAATGCT AAAGTTAGCG TTCTTCTCGG CTGCCCAGTA TGCGTCAGCT GGTTTGGAAA
AGATAGGACG AGTTGGAGGA TGGCAAACAG ACTTTGCTGT GACCTGGGAG TTGAGCACGC
ATTTATGTCG AATGTACAGT TGCCTCGGTG AGCATGAAGC TTGTAAGAGA GTCGCCAACG
ATGTGGTGTC CCGCAGTTCG TCCATTTTTG AAAAGCTTGG TGCTTTCGAA GCTGTCATGG
AGTCTTCTCG AGTTGAAGGG AATGTAGAGG AAGCATTCAA CATAGGGTTT GACGTCCTCA
GAAGCTTGAA TGAACCTTTT CCCAACAGAG TTAGCAAAGC GCTTTTAATT TGGGAAATTG
TCAAGACAAA ACGTATCTTG ACCCGGAAAA CATTAAAGGA TTTGTCAGGC CTACCAAAAA
TGGCTGACGA AAGAGCATGT GCTACGGTTC GGTTTCTAAA ATTACTATCC CTCACCTTCT
TTGCCATGGG AAACTATTTC AGCTACTTTG TGGCATCGTT GAGAATCGTC AGACTGAGCA
CAAAGTACGG TGTTGCTCGG GAATCTCCAA AAGCATTTGT GGTCTTTGGG AATATTCTAT
CCCAAACAAG TCGACACTTC AACGAAGCTA GCCGATACAT GTCCGTTGCG CTGTCTTTAG
GTGAAAAGGC GGGCAAATCT GGAAGAGCGC AATCTCTTGC CGTTGGAAGT TGGATCTTGA
CGCCTTTGCA AGGCACCGTC TCGGAAGCAG TTGGTCAAGC TCTGTATGGA TATCGGCTCG
CAATGGAGTG TGGCGAGGTT GTGTGCGCGT GTACCTCAGT TCTTTCTTAT TGTGGCCTCT
ATTTTTGGAG TGGACTTCCT ATACCACCCC TAATGAAAGA TCTTCCAACT TTCCTGACCA
TGCTAAGCGA ATATAAGCAG GTACGGCATT TCAAATTCTA GCTCTGCATG GGCATCCGAC
TGTTTTCTCA CCCTTTTCTT TCAGACCGTG CACGAAGTAG GACTCTCCTC ACTGATGTAT
TTCATTCAGA CATCAACAGC GGAGACCAAT CCGACTGATT TATATGACGA TACCGTATGG
ATGGTCAGAT GTCAGAATGC AGGAGCCGCT ATTCAAGTCA ATACCATTTG TCTATACCGC
ATAATATATG CTTATTACAT GCAAGATCTC AGTTCAATAC GAGCTTCTCA ACTAGATGCG
CACCGAGCTG TAAAGGTACA ATTGTCAAGA ACTTTGCAAG TTGTCGTGTG CTGGCTTTTT
GTGGGGCTCT CCGATTTCTT CTTAGCACAG TCTGGGTGTG GCATTGAGTT TCAACGAAGT
GGCCAAAAGA TTTTACGCAT GATGCGTCGG TTGGTCGTCA AAGGGGACAG CAAATGCGAG
CATATGTTCA TGTTCCTCAG GGCAGAAAAG TACAAACTTG TATCAAAACA GAGCAATGAA
GTTCTAAAAT CCTACGACGA GGCCATTTCT GGAGCCGGAC AGGCTGGATT TTTCAACCAT
GCGGCCTTGG CGAACGAGCG CGCCGCACTA TACTGTTTAG CGCGTGGAAA GGAAAAGAAA
GCGGCTCAAT ATTTCCAAGA AGCCTGGCAA GGGTACCTGA ACTGGGGAGC CCATTCTAAA
GTTGACCAGC TTGGGGGGTG GTACTCAGCA TACATACAAC AAAGTTCTAG AAAATAG
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| Protein sequence | MAIPTILTVE EPERDLYGRV KEKAAISVAN DQCMDLATAM RGSEKSHVIL VHARLRGTDK
ARGRLLHIRK VRLSPVGEPW PAIVDAFSDL CVQCLASERR SKIRKALCEE LESDVNQLSH
LIPNFKALVD GFLESDDDTE GNGDWNDIRA SFRRNEFGFT RIKLLFQRFL RAICHPISSR
IVLLLDDVQW ADQLSLLLIE ALLSEGEPVS GFLLAITSDE PGLFRRAQVN RDLVNATKIR
IRNLSKNDWI EMTKQTLKKA KSYIAAEELD ILFKKTMGNP FLTVLCVKAI DEGGLLKELE
IEADNGVKAG ILSVIKGRLS RLAKPAQDAL FLGACFGLRF CMDWVAPLVP TYGSTRNASL
QPDVMPLNWG SGRLDDSEHL SESELKETLN EAIVNGLVTK RCGIPWYEFT HHSIRDAAYD
LFRNSSCEHT LRKVRFSSSS EDDTILWTAV DHLNLGSSQL HEERKLIELA RLNGRAAEKS
MLKLAFFSAA QYASAGLEKI GRVGGWQTDF AVTWELSTHL CRMYSCLGEH EACKRVANDV
VSRSSSIFEK LGAFEAVMES SRVEGNVEEA FNIGFDVLRS LNEPFPNRVS KALLIWEIVK
TKRILTRKTL KDLSGLPKMA DERACATVRF LKLLSLTFFA MGNYFSYFVA SLRIVRLSTK
YGVARESPKA FVVFGNILSQ TSRHFNEASR YMSVALSLGE KAGKSGRAQS LAVGSWILTP
LQGTVSEAVG QALYGYRLAM ECGEVVCACT SVLSYCGLYF WSGLPIPPLM KDLPTFLTML
SEYKQTVHEV GLSSLMYFIQ TSTAETNPTD LYDDTVWMVR CQNAGAAIQV NTICLYRIIY
AYYMQDLSSI RASQLDAHRA VKVQLSRTLQ VVVCWLFVGL SDFFLAQSGC GIEFQRSGQK
ILRMMRRLVV KGDSKCEHMF MFLRAEKYKL VSKQSNEVLK SYDEAISGAG QAGFFNHAAL
ANERAALYCL ARGKEKKAAQ YFQEAWQGYL NWGAHSKVDQ LGGWYSAYIQ QSSRK
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