Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50520 |
Symbol | |
ID | 7199242 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011698 |
Strand | + |
Start bp | 298480 |
End bp | 300656 |
Gene Length | 2177 bp |
Protein Length | 657 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185413 |
Protein GI | 219130523 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCGAGTCTTT GTTGGTATCG TATCGTAGTG TACGTCCTTC CTTGCGAGTA CATGCCGGAT TACAGTAACA ACAACAACAA CAACAACAAC AACAACAACA ACAACAACAA CAACAATAGT ACCATCAGCA TCAGTAACAA CGAGTCCGCT GCCGGCAGTA CCAATCCAGT CTCGACGCCC CGCAAAGCGC CTCCCCACAC CACGACATTG TCTCGTGGAC GTCGTTCCGC ACGGGTGGTG GAGCACGATC CCGTTGTTGC TCCCGGGTAC GGCACGCGCA AAGACTTGCA CCGCTTGGCG GCCGATCTCT CCTCCAGAGC GGGCGTCGTA ACGGTCGCCG CGGTCGAAGC CATTATGAAG GCTCGCGGAC GCGGATTGCG GGGGAATAGT AACACTCCGC ATACCGACCA AGACGCTCCC AGCAATGCAC CGCCGGCTTC GTCGGCGTGG GCGGATTTCA TGGCGGACGA AGGCGTCAGC AGTAACAACA ACAACAACAC GAGCAACAAC GGTACCGGAA AAGGTCCGCG CCCGCAGTCC TCCACGCGGG CTTCCGGTGC CAACGCCAAC AAGACCCAGA ACGTGACCAA GTCGCCCGGA ACTCAACGTG ACTACGAGTT GCCCATTCTC AGTGCTTATA CTTTTCATGG TACCGCCGGC ACGCATGGAA ACGCTACGGA ACCCGCCAAG AAAAAAGCCA AGACTCCCAA ACAGAATACC CAGCAACCGG GGTACACCTT GTTGCAAGCC GGAACCCTCG ATAGTACCAT TGTCGGACGC GTCAAGATTA AAACACCAGA GCCCTACCAT CTGATGGTTC CCACTCGTAT CGCTATGGAT CGCAAGTTCA CCAAAATCTT CACGTCCTGC AATGCCGTTC ATTCCATTGC GATTGACGAA GCGGGCGTTG CCTACGGTTG GGGCCGGAAC GAGAGTTCCC AACTCGGAGC AAGCTTACCC AATGTGGTCG TCCTCCCTAC CGAACTCGAA CTGCCCGACA AGGTCGTGGG CGCCGCCCTC GGCAAGTCGC ACACGATTCT GCAACTCGCC GACCAGTCCC TATGGGCTGT CGGGGCCAAC AAGGCCGGCC AGTGTGGCGT CCGCGTGGGG ACGGAAGTCA TTCCCAACTT TCGTAAATGC GTCGTTCCAG AATCTGTAAC AATTGTACAG GTACGTTTTC TTTCTTGTTT GCTTCTTTGG TACAACCGTA TGGCGCACAA AGGTGACTCA CGCTTTTTCC GTTGGATTCT ACTCTTTATC ACAGATTTCC TGTGGCGAAG ATTTTTCGGT CGCTCTCGAC TCCGAGGGCT ACCTCTATTC GACCGGCTCT TCGGAATACG GACAACTCGG TAACGGCGAG ACGGGGGAAT ACTTCATCGC CGCCAACAAG CTCGGCTTTG CCAATTGCAA CGTCTTTACG AAAAGATCCG TGTTTTGTCA CACTCCTGGT GAAAACGCGC ATTCCAGCAA TGCGAAAGAT AAGGTCGTCC CTCTCGCAGA GGATGTTCGT ATTCAATCGA TTGCCTGCGG AAAACACCAC GTGGTTGCCG TCGAAGCACC GTCGGACCAA AAGCCTCGAG TATTCTCTTG GGGTTCCGGC GACTACGGCT GTCTCGGACA CGGTGTACAA GCCGACGAGT ACTTTCCCCG TATGATTGGT GGATTCATTA ACACTCCGCT CGGAAACAAT AAGGATGTTG TCGTTACTGC TGGTGCGCAC TGCAGCCTAA TTCGCACATC CAACGGACAC GTGTACTACT GGGGCAAACA CCGGCCCGTG GGCGAAGCCG TTATGAGACC GCAACTCGTG GATGTTCTAG CCAACAACCA GCACGATGTC AGGCACTTTG CCGCCGGAGC GCAAACGGTA GTGTGCAGCA CCAGTTTAGG ACAAACTGTT GCTTGGGGAC AAGGACCACA CGGTGAATTA GGTCTGGGGA CGCCGAAATC CAGTGCCAAA CCGAGCTTTG TCTCCGCGTT GGACGGCGCT CAAGTAATGG ATGTGGTCTG CGGCTACGGG CACACGTTGT ATTTGGTGCG GGGAGAAACA CCGGAAGACA CCAAAATTAT TGCGGGTCTC GCGGAACTCG ATCTGGATTC CGTGCAAGAC TTGATTGCCG GCGCGGTGGG AGTCAAGTAG GTATAAACAA TAATCAAAGA CGAATCGTTT TTGTAAG
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Protein sequence | MPDYNNNNNN NNNNNSTISI SNNESAAGST NPVSTPRKAP PHTTTLSRGR RSARVVEHDP VVAPGYGTRK DLHRLAADLS SRAGVVTVAA VEAIMKARGR GLRGNSNTPH TDQDAPSNAP PASSAWADFM ADEGVSSNNN NNTSNNGTGK GPRPQSSTRA SGANANKTQN VTKSPGTQRD YELPILSAYT FHGTAGTHGN ATEPAKKKAK TPKQNTQQPG YTLLQAGTLD STIVGRVKIK TPEPYHLMVP TRIAMDRKFT KIFTSCNAVH SIAIDEAGVA YGWGRNESSQ LGASLPNVVV LPTELELPDK VVGAALGKSH TILQLADQSL WAVGANKAGQ CGVRVGTEVI PNFRKCVVPE SVTIVQISCG EDFSVALDSE GYLYSTGSSE YGQLGNGETG EYFIAANKLG FANCNVFTKR SVFCHTPGEN AHSSNAKDKV VPLAEDVRIQ SIACGKHHVV AVEAPSDQKP RVFSWGSGDY GCLGHGVQAD EYFPRMIGGF INTPLGNNKD VVVTAGAHCS LIRTSNGHVY YWGKHRPVGE AVMRPQLVDV LANNQHDVRH FAAGAQTVVC STSLGQTVAW GQGPHGELGL GTPKSSAKPS FVSALDGAQV MDVVCGYGHT LYLVRGETPE DTKIIAGLAE LDLDSVQDLI AGAVGVK
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