Gene PHATRDRAFT_50510 details

Gene Information

• Locus tag: PHATRDRAFT_50510
• ID: 7199288
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011698
• Strand: -
• Start bp: 266979
• End bp: 268922
• Gene Length: 1944 bp
• Protein Length: 647 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002185459
• Protein GI: 219130619

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTCGA CTCAAGAACA AGGGGAGGCC GTGCTAGCTA GAAGTATGCT GGAGAAAGCC 
ATCGTCACGA GCGTATGTCG ATTTTGCTTG GTGGGCGCCG CGCTATTGTC TGCTCAATAC 
TGCCAGGCGG CGGCAGTGGA GGCATCGAGT CTCGAGCATC TCTACCGACA AGCTCGGCAC 
GTACGAACAA CCGAGGGTCA CGCCGCCGCC GTGCCACTCT ACCAATCTAT AGTGCGAGAA 
TACAATCCTT CGGACCGCAC GGCAGCCTCC CGTATAGCTG CCTGTTCCGT TTCCGGAGTG 
CACCATGAAA ATCTGTGCCG CGTGCCTGAT GCTGACAAAC TTTTCGCGCT ACGATCGCTA 
CTGTACCGTT CGCGATTTAC AGCGCGGGCG ATCGCGTCTC TCTTTGGTAT CACAAGCTCC 
GATCATAAAC TCTTTCACGC TTCTTGTCCC ATCTATTTGA CACCGTCATC GGCCGGTGTT 
ACAACTGTAC CGTCGTTGGA TTGTGGTACC AACGATGCCA ATGTATTGCC CATCAAGAGT 
CTGGCTACTC TCTTTCTCTT GGGATTGGCG GTTCCACGGG AAGCACTCGC ACTTGCTCTG 
ACTCCCGAGG GTGTCCAGAT ACTGCAAGAC TTGCATCTGA TTGCTCCTTG TGAAATAGAT 
AGCAACTTAC TGGTTCCGTA CGCTCAAATC TTTCCCATCG ACTTGCAGAG CGACCGAACC 
TTATATATTG TCACAGATTG GCACCCGCGC GTTCTCTCGA CCACGAAGGT CGGTACCTGC 
TCGGACGTCA GCAACGCCGT CATGTATATC GGACCCGATA GTTTGGCACT AGTACAGCAT 
TGGCTACAAA GTTCTCGTAT TCCCTCCTGT GGGAGCTTGC TAGACCTCTG CACGGGGTCG 
GGAGTGCAAG CCTTGGCTGC CTTGACAATG GAAAAGGCGA ATCAAGCGGT ATGCGTTGAT 
CTCAACCCCC GTGCGCTGCA AATGACAAGG CTCAATGCTA TTTTGAACGA CTTGGATACT 
AAGGTGCAAT GTGTGTTGGG TGATTTGACC TCGGACGTTG GAAGGATATA CACTAACAGT 
GAAGGCAGCC ATGATCTCGC CATTGACGAC AAAGCCCAAC CTTTATTGGA TGTACTCCGT 
CGAATTTCCC CTCGATTTGA TCTAATCACG GCGAATCCAC CCTTTTTGCC CGTACCACCA 
GAAATCACAC AGGCACGGCA CGGTCTGTTT TCTGCGGGAG GTCCCTCCGG CGAGGCCGTG 
CTCGCTAGTA TCGTGCAACT GAGTTCCTCC TTGCTCTCCA ACACCGGCTT TCTCGCCATT 
GTGTCCGAGT TTTTCTTGAA AAGTGTTGAG GCTGCTTACG TGGCACCTTG CAGTGTCAGT 
AGTAGGGGTA GCGAAGAATC AGCGAACGAG CCGGGAGTAC CGTCCTCTCC CGAGGTCTTG 
CTGGATTCCA ATTTTGATTT ACTCCCCCAG CACGATGCAC TGGACCGTCC TGCTGACGAG 
CTCCTGTCTC GCATAGAGTC TTGGTGGAAC AACAATCAGC ACGATCCTAA GCATGACCTC 
TCCAGCGTAG TCGCGTCATC TACCACGAGT ATCGCTACCA CTTGTAGTAG TACCAGGGCT 
CGTGGACTCC TCTTGACGAA CGAATATCCC ATTACTGCCG ACCTGTATGC CGAGCGACGG 
GCCGACAATG CGGAAGAATT TGCCATTTGG CAACGCCACT TGCAAAGTTT GGAAATTGGT 
GCTTGCTCCC CGGGCTTTTT CATTCTGCAA AAGATGCACC CCGCGGTCGA CGGAGAAGTA 
CCGGCATCGT CGTGCTTTGC GCACCAAACC GTGCCGCAAA CGTCCTGGGG GTCCCTGTGG 
ACGCCGTCAA ACCCGCAAGC CGTGGCGTAC ACAAACCGAG TTCTGTCTGA TTTTTTTACG 
AGGCCAAATT TGGAAGAGGG GTAA 

 

Protein sequence

MKSTQEQGEA VLARSMLEKA IVTSVCRFCL VGAALLSAQY CQAAAVEASS LEHLYRQARH 
VRTTEGHAAA VPLYQSIVRE YNPSDRTAAS RIAACSVSGV HHENLCRVPD ADKLFALRSL 
LYRSRFTARA IASLFGITSS DHKLFHASCP IYLTPSSAGV TTVPSLDCGT NDANVLPIKS 
LATLFLLGLA VPREALALAL TPEGVQILQD LHLIAPCEID SNLLVPYAQI FPIDLQSDRT 
LYIVTDWHPR VLSTTKVGTC SDVSNAVMYI GPDSLALVQH WLQSSRIPSC GSLLDLCTGS 
GVQALAALTM EKANQAVCVD LNPRALQMTR LNAILNDLDT KVQCVLGDLT SDVGRIYTNS 
EGSHDLAIDD KAQPLLDVLR RISPRFDLIT ANPPFLPVPP EITQARHGLF SAGGPSGEAV 
LASIVQLSSS LLSNTGFLAI VSEFFLKSVE AAYVAPCSVS SRGSEESANE PGVPSSPEVL 
LDSNFDLLPQ HDALDRPADE LLSRIESWWN NNQHDPKHDL SSVVASSTTS IATTCSSTRA 
RGLLLTNEYP ITADLYAERR ADNAEEFAIW QRHLQSLEIG ACSPGFFILQ KMHPAVDGEV 
PASSCFAHQT VPQTSWGSLW TPSNPQAVAY TNRVLSDFFT RPNLEEG