Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50507 |
Symbol | |
ID | 7199232 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011698 |
Strand | - |
Start bp | 251393 |
End bp | 252407 |
Gene Length | 1015 bp |
Protein Length | 285 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185456 |
Protein GI | 219130613 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.045074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACCTCT TAATAACAAC TGGGAAGACT GTATCTCAGA AGAAGCATCG CATTGCGATT TCCACGCTTT TACTAGTCAA CTTAAGCTAC GATGGCGGGC TTGCAATAGG TGCCTTCGTC CCCGTTTATT CACAGTCAGC TCATCTGCAG TTCTATTCTG CCTTGTCTTC ATTGTTGTCT CAATCTGAGC TGTTCGACTG TGCTGGGTAT TTTTCAATAA ACCCCGGTGC TTCTTGTCAC AAAACTGAAG CAGCAACGAC AGCCCTAGAA GCGGATCGGG ACGAGGCTCT CTATTTTGCG CATTACTGCG AAGAAAATGT CTGGAGGTAA GGGAGACATT TGAATAGTGC CAACGCAACC TTACACAGCA TAAGTCGCTC CTCACCGAAT GTATTGTGGC CGTATTTGCG GGCCGCTTAT TTCTAATAAG ATTGGCATAC CGTAAAATGA TGCAGAATGA ACACAACAGG AACCGCTACC ACGTCGTCTT TTGTACTAAT AGGAAAAAGT GCCTCCCCAT GTTTTACCAA ACAATCACGC GCAACAACCG CATACCGTGC GTTTGGAATT ACCATTGCAT TCTTTTGGAG ACAAACGCGA CCTCGACAGA AACTGTCGTC TTTGATATGG ATAGCCAATT GCCATTTCCG TACCCCCTCG ATCGGTATCT GGACCGTACG TTTCCGTCCA CCATGGATTA TGCTGCCGAG GATCTCGAAC CGGTATTTCG TACGGTCCAA GCATCCGCGT ACATAGAGAA TTTATCCAAT GACCGGTCTG GAAAAGAATT TTGCGATGTT GCCAACGATT GGATCGCGCA TTCTCCAACC TACAAGGAAA TAGGCGAGGT AACCAGTGCC AACCTGGATC AGTTCTCCGC CCCCCAGAAA TCGCAACGAG ATTCTCTCTC TGAATTTGGC GTCATACTGT CAAAGAATGA AATTTTGGAG TATTCATTCT GATAACTAAT GTGACCCAGA CAATATGAGG GCGCAAAACT TCGTGATTTA TGTCT
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Protein sequence | MYLLITTGKT VSQKKHRIAI STLLLVNLSY DGGLAIGAFV PVYSQSAHLQ FYSALSSLLS QSELFDCAGY FSINPGASCH KTEAATTALE ADRDEALYFA HYCEENVWRL AYRKMMQNEH NRNRYHVVFC TNRKKCLPMF YQTITRNNRI PCVWNYHCIL LETNATSTET VVFDMDSQLP FPYPLDRYLD RTFPSTMDYA AEDLEPVFRT VQASAYIENL SNDRSGKEFC DVANDWIAHS PTYKEIGEVT SANLDQFSAP QKSQRDSLSE FGVILSKNEI LEYSF
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