Gene PHATRDRAFT_50343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50343 
Symbol 
ID7199079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011696 
Strand
Start bp368977 
End bp369801 
Gene Length825 bp 
Protein Length169 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185266 
Protein GI219130215 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0828605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCCTCACCAG AACAGTAGTA GGTAGTAGCG AATGCCTAGA TTTTGGGGCT GCCAACTATA 
TCGACAACTT TACAGGGGTT CCTATTGGCG TAGTGCAAGT ACCCGCTGTC AAACACATCG
TCTATTGCCT CGTTTAAATC CGGTTTCTTC CTGTAGCGGA ATCGAGTGAA AATTCGTCAT
CGGCTATCCA ATTGCGATGC GGTTGGTCAT TCTGTCACTG GCATTCCTGG TCGGTGTAGA
AACAAGACCA CAATCGTTCG CCACGACAAA GCGCGGAGAG TGCATGCCTT CCTCCGCGGA
CCTCAATCAC TACGTTTGCT TTTCGGATCG TCCGGTGGAC GCTCTGGTGT ATCAGTGTGC
AGACTCGGAA GCCCTTTGTC CAGATTGGGC CAAGGCTGGC GAATGCCAGA AGAACCCGGG
CTACATGCAG CTGGAATGTC GGCATAGTTG CGACACCTGT GTCCCTCTGC ATGTTGGTAT
GACACAGATT GCGCCTCTTC AGGAAGCGCC AACGCAGCAA CAAGTTCACG ATCGGCTGGT
ACAGACGCAA CAGCACGTAC ACAACAAGGC GAAAGAGAAC TTCAACGTAT TACATAACTG
TCTTAACTAC CACGAACTGT GCACATTCTG GGCAGTCGCG GGTGAGTGCG ACAACAGTCC
TGATTTTATG CTGCGGACCT GTCGGCCCGC GTGTTACATA TGTTAGCATT CTTTCGCCAT
TGTCACGCTG CACATTGAAG AGTGCGTTTT TAACATCTTG CATTATAAAG GCACGGGATA
AAAAGGAAAC TCTAGAACAT AGATTTTCGA TTGCATCGAA CAGTC
 
Protein sequence
MRLVILSLAF LVGVETRPQS FATTKRGECM PSSADLNHYV CFSDRPVDAL VYQCADSEAL 
CPDWAKAGEC QKNPGYMQLE CRHSCDTCVP LHVGMTQIAP LQEAPTQQQV HDRLVQTQQH
VHNKAKENFN VLHNCLNYHE LCTFWAVAGE CDNSPDFMLR TCRPACYIC