| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50330 |
|---|
| Symbol | |
|---|
| ID | 7198988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011696 |
|---|
| Strand | + |
|---|
| Start bp | 328935 |
|---|
| End bp | 330178 |
|---|
| Gene Length | 1244 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185174 |
|---|
| Protein GI | 219130022 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.162709 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACCAG ATGACGCAGA CGGTGCGTGT GTCATCCGTC GCTACTTTCC TTTGTCTGTG
CAACTATGGA AGCCACTCGT TGGTTCAAGT AACATGTAAA GGATAACTAC TCTAAGAAAT
ACTGCGGGAG CTCTTTTCCC ACTTCTGGTT GGTAATCACC GATTGGAAAA GAGCATCTCG
TAGGGCACTA ACAGGCCAAC GATTGTTCTA GGTATAACAT ACTTTTATTA ATTTGATTCC
TTCAATCCGC AGGATGACAA CAATTATCAA GGCAATTTCG GCGCTTTCTT CTGTGCGAGG
CTACTATCGT GTCGCCTCGT CCGCTTTTCC CATACGTATG GGTGCAACGG ACTCAGACAT
GTTCCGTATT GACTTTGTCG ATGAGGACAA TACCTTGAGC GTGTCGCTGC AAGACTTTCA
CCTCGCTTTT CTGACGTCGC CTTTGTTCCA ATTCGAGCTG TGGATTTTAT CGTTCGCGAC
GGTGTCCGAC CCGGCCACTA CCACAACGGA ACATTTGGCA GCGGTAACAA GTGGTGACAA
GAGCAGTTTC GGACCGTGGA CTGCGTGGGC AGTCGAGGGT AAACGCAGTG CCCCACTTAC
AGCCTCTTCT GAACCGGCCT CAGCGTGCCA AATCATGCGG TGCTACATCC AAGGTTCGTT
CTTGACTGTT TCTACGCGAC CTTTTTGATA ATTTGTATTG CTGTGTGTTC TAATGCAGTG
TTTTACGCTT TTACATTAGG CAAAACCTTT TGTGATACGT GGTGGGCTGT TGAAAAAGTG
GCTGACCGAC CTAATCCGGA GCTCGTTTTT GGATCGGCCT TTAAATTTTG CGACGATCAT
AAGCCTCTAA TGTTTCGCGT GCTGGACCCT TTGCACCGCT TGTACAGTCG CCTATTGTTA
GCGTCAGCCA TGATCAACCT GATCCAACAA AAGCAAAAGT GCGAGTGATT TACTGTTAGC
GATAAATTTG TGGTCTCACC TTTCAGATAG ATCAGCAATA TCATACCGGA TGACCATCTT
TTATTGATTT TGCATGCCAT TGGTCCCCAG TCGACGGCCG ATTGCCAGCT CGTGTCTCCT
TGGAAGATTG ACGGATGTGA CCGGTTGTCT CGGATGGAAC ATACCGATAC AAAATTGTTT
GATGTGACAT CCGTGACAGT GAATAATTTC CCTACGTTTG TGCAGCATGA GATTTGTAAC
ATAGATTGTA AACAAAAGGA ATACGTAGCT CTTTCTTTGG AAGG
|
|---|
| Protein sequence | MSPDDADGAC VIRRYFPLSV QLWKPLVGSS NMMTTIIKAI SALSSVRGYY RVASSAFPIR
MGATDSDMFR IDFVDEDNTL SVSLQDFHLA FLTSPLFQFE LWILSFATVS DPATTTTEHL
AAVTSGDKSS FGPWTAWAVE GKRSAPLTAS SEPASACQIM RCYIQGKTFC DTWWAVEKVA
DRPNPELVFG SAFKFCDDHK PLMFRVLDPL HRLYSRLLLA SAMINLIQQK QKCE
|
|---|
| |