Gene PHATRDRAFT_50270 details

Gene Information

• Locus tag: PHATRDRAFT_50270
• ID: 7199113
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011696
• Strand: -
• Start bp: 150705
• End bp: 154799
• Gene Length: 4095 bp
• Protein Length: 1319 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002185218
• Protein GI: 219130114

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.293726
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCTTGTTTGC TTTGTTTCTT TTCTCCACTA AAGGCACGGA CACAAGTATG CACACAGTGT 
ACAGCCTACG GCGATTGTTA GTATGAGCAC AGTAAATGGA CTGGTCAGAG AGAATACGAG 
TCGAGAAAAT ATCAGGAATC GCGCTGCGTT GGCATTAATT ACCGACGACG AAATGACTAC 
GGCGGCTTCG ACCGATATGC AGGCTTCTAT CGGCTCGGTG GAACCAGTTT GTCTGGAAGG 
CACCCTGCAT TGTCGAAAAG GTCGCAATTC TGCCTTTAGT CCGGCCTTCT GGAAACGGCG 
TTTTTGCTAC TTGGATTTGA CGGACGGTGG TTCGATTACT ATTTACAAAG AACCTCCAGA 
GTACGCCATC CATCGTCAGG CACAAGAGCA CCATCAGCAT CATCAATCCC ATAGCGATAC 
CGACACAAAC GAGTCATCTT CGAAACCTTC GGCAACGGTG CTGCGAACTG TGTATTCACG 
ATTGCAACGC TCGCTGTCAG TACCTTCCTT AAAGTCTCTC GCAGATGTTG GCAAAGTCGA 
CATTCACATT CCTGCCCAGA TGCCTTGGAA AGTGAAGGAT GTGGAAAACG ACTCATCATG 
TTTTGTTCTT GAGATTCCAA CCAATGGTGA AGAGGGATTT CCCTTTGCGG ACCACTCGGA 
TGCCGCGAGT TGCTCTCTCG ATCAACCCCA CAACTCCTTT GCGGACGATG GTTTACATTC 
GATCGAAGAA GACGAGGAGG AAGACGTGGA CGAAGGTTGG GGTCACCTGT CCTCCATACA 
AGAAGGAAGT GTGGTTGCCG AAAGCGAACT TCACGACGAC ATTGTACGAG CCAGAAACCA 
TGGACGGCCA ATGAGATTGT ATTTTCGTTG CAACAAAGGC TACAGCAACG AGAAGGCACT 
CTGGCTGCGA GCTTTTTCGC GTCTCGGGCG GCTTTCAGAT GATGTTCGCC GCAAAAAGAG 
CCTTCTTACT TCGCTGAGAA CTCCGTTGCA TTTGATGGGG CATAACCGGA TGCGGATCCG 
TAGCCAACGA GATGCCACTT TTGCGAGCGA TACTCGACAA CTAGATCTAG ATGAGACGGA 
CACCGAATCC GTGGACTTCC ATATTGCCAA CGATGTGGAG CACCAAGTAC GGGGATACGC 
AGGCCGGGCC AGCCGTGATA AAGAATTCCG TGTCCTGCCA ACCTACGCCT ACCCACATCG 
TTGGATGACA CACCGGGAAA TGAGGGATGA CATGGTATTG CCTGCGGGTC AGTTTCATGA 
TCTCCGCACA CCCGATTGCA AAGAGAAGGA AATTGGCTCA CTGCGTGTTG AAGTTCTCCA 
GTGCATAGGA TTACCAAAAC TAGACCGAAT GGCGGAGACC GATGCCGTCG TATACTTGGT 
ATGTGGATCC TACGCCTTCG CGACCGACAT CATTCCAAAC CGGGCCAATC CCATGTGGCT 
ACGGATGGCT CGTAGGGCTT GCATTTTTCC TTTGTTTCAC GCGTATGCCC GACTATACGT 
AGGAGTCTTT GATGACGATG GAAAAGGAGT GAAAGATGAT TTCGCAGGTC GTGTTGTGGT 
CGACCTGGCG CGATTGCGAC CGGGAACATC GTATGATGTG ACTCTTCCCT TGCGACTATC 
GACGCATGTA TATTCTCGCC GACGCCGTGG GGCTGTTCGA TTACGATTTA CTTTAAACTG 
GAACACGGAA AAGGACGCTC TCCTTTCCTA CTTACCAAAA AGTCTCAAGA TACCTCTGCC 
GCAAAATTCA AAGCCCAGGA CGGGTATAAC TGTTGCGTGT GCAGACGAGA AGGCCTTTCG 
GAATGTTGCT ATCACGATCC ATGGTGCGCA CATCCCCGGA CGCTTTACAT TTCAGCAGAT 
GAAGGCAGCA ATCCGAGAGA TCAATTTCAC GCGCAAGTAT ATTTTTACCT TTATCCGGAT 
AGAGCTTCGG GATACTCGAA CCTGGCAATA TCCCGGTGTT TCAGCGTATG TGTTCTTGAC 
CTGGATGCAC AGCATCTACT CAAATGCATT TTCCTTAGTA CCGGCATACT TTGTGCTCTA 
CCTACTTCTA CAACTGATGC GAACATACGT CAAGTATGGC ATAGACGGTC CTGGTCAGCG 
TGGTTTCGTT CCACCGTCGT GGGAGGAAAT GTTCACTTCC CTTTTCCGAA AACGCGATAA 
GAACTACCGT CCAATCGAAC CGCTTGAGCT TGGCTTGCGC CCCTTACCTT TAAGACGCCG 
AAGGACTCCA GAGTCAATGT TGAGCACGTC ACCATCTGTC TTTGAACAGT TCAACTACAA 
AGTCTCGACA CACATTCCGA AGGGCAAGTG GTTATTTCGT CTACTAGGGT TCTTACCAGA 
CCGAGACGAT GCGCAGCTCT CTATGGAAGA TGATCATCTT GAATTCCCTT TTGCAAGTGG 
AAAAATTTAT CCAAAACTGA GCGTGAAGGA GGCTCTCGCA CTGCGTAAAG GAGAGACGGA 
GAAGGTTACG CCTGAAATTC CGAATGCGTC GTTTCAAATT TCTACTACCA AGCACGGAGA 
GGTTCATTCA ATGATGCCTA GATTCGACAT GGAATTTGAT CTCCTGAGGA AGAACTCCTC 
CGGTTTCAAG GACTACGATT TTGAGGAAGA CTATTTTGCT CCGAGGAAGG CTGTTGCATA 
CACCGGGAAA AAAGCTGGAA AGAAGGCTGC CTCCACACTA ACCTACGCAG CATCAGAGAT 
CACCGAACGT ACGGGCCTGC ACAATGTCGT TTATCCAATT CGTGATGGGA TTGGGATGGG 
TTTAAATCAA GTGAGAGATG GTGTAAGCTC TGGCGTCGAC ATGCTCAATC CAAGGCACCA 
TAGAAGATCT AGCAGCTGCG AACCGGAAAT ACTCACCTCG AGCTTCAAGT CGCATCAGAG 
ATCGAGCGAC GAGGATCCAA ATGAGCTTCA CACAGGCGAG AATCGGTGGC TACGGAGCAG 
AAATTCAACA GCACTAAGCT GGAGTTTCGA TCTTGAAAAA ACAAATGATA TTGCGGTTAC 
CAACGTAACA AGCGTTCACT CTGCTCCGCC CAGTGAAAAC ACTTCTGAAC CTTCATCTCA 
GAATACCAAT GCAGTCGTCC CGGAGCAAAA CATTGACGTG GAAGGTCCAA GTTCTGGGAA 
GAAGTTGACA GATGATCTTG ATGAAATCAA AGACAAAATG CACGAACTTA CGTGGCACAG 
GTTTGACGAC AAAGCCTATG TTCTGAATAA GACTGGTTCA CTGTATTTTG GAGATTCCAA 
GAAACCCGAA AAGCGACGCA AGACTGATGT GCCTCGAAGA CTCGACAAGC TGCTCCATCT 
CGGCCAGTAC TCGCATTCAA ATCCGTTTGT GGCCCGGGTT GGTCTGTATG TTGAGCCAAT 
AATTGGTTCC TCATACAGCT TCCTCTGTTT ATTCCGTGCA GGCTTCAACG TTGTTACATG 
GAGAGATCCA ATGCTAACAT TTTGGTTGTC CCTTATATGC GGAGTTCTCG GCTTGGTTCT 
TTTTATTTTT CCATGGAGGC TTTTTCTTTT CATTTTGGGA GTTCTTCTCG TTGGGCCGCA 
AAATTGGGCA ATCCGTGTTC TTCGAGAACG TGGCCACTTG CCACCAGCCA AGCTCTCGCG 
ATCGGCAAAA CACCGCCTAA ATCCAGAAGA CCCCCAGTCT AGTCAGAAAG ATGAGGAGAA 
TCACAATTCG TGGAAAGACC AGCCTGTGTT TGCTTGTCAT CATCGACCGA ACCGGAGTGG 
GCCGGTTGGT CCACCGAACG TTGATCCCAG GGAAGTCCAT CGAGTCGTAG TTCCATACAG 
TCCTCTGATT TACCAACGCT TTTACGACTG GCCTCCAGAG CCACAATACG CTCAAGTGAA 
GTGTGATCAA ACGGAAGATG CTCGCCGACG CAGCACCTCA AACTCTCCTT CGTCACGGGG 
TCGCGGGATT AATCGGTTTC GTCGCCGACA CAGGCGACGC GGCGTCTCTT TGGATCGTTC 
CGTGTCGTCT TCTCCAAGTC CGAGGAAAGG GACATCGTCT AATGAAACCC TTTGGTCTAG 
CGTTGGTAAG AAAGACACGT AGACCTACTT TGGAATGATA GTTGATTTAA TCTTGTCAAA 
GAAACTATTG CGTCT 

 

Protein sequence

MSTVNGLVRE NTSRENIRNR AALALITDDE MTTAASTDMQ ASIGSVEPVC LEGTLHCRKG 
RNSAFSPAFW KRRFCYLDLT DGGSITIYKE PPEYAIHRQA QEHHQHHQSH SDTDTNESSS 
KPSATVLRTV YSRLQRSLSV PSLKSLADVG KVDIHIPAQM PWKVKDVEND SSCFVLEIPT 
NGEEGFPFAD HSDAASCSLD QPHNSFADDG LHSIEEDEEE DVDEGWGHLS SIQEGSVVAE 
SELHDDIVRA RNHGRPMRLY FRCNKGYSNE KALWLRAFSR LGRLSDDVRR KKSLLTSLRT 
PLHLMGHNRM RIRSQRDATF ASDTRQLDLD ETDTESVDFH IANDVEHQVR GYAGRASRDK 
EFRVLPTYAY PHRWMTHREM RDDMVLPAGQ FHDLRTPDCK EKEIGSLRVE VLQCIGLPKL 
DRMAETDAVV YLVCGSYAFA TDIIPNRANP MWLRMARRAC IFPLFHAYAR LYVGVFDDDG 
KGVKDDFAGR VVVDLARLRP GTSYDVTLPL RLSTHVYSRR RRGAVRLRFT LNWNTEKDAL 
LSYLPKSLKI PLPQNSKPRT GITVACADEK AFRNVAITIH GAHIPGRFTF QQMKAAIREI 
NFTRKYIFTF IRIELRDTRT WQYPGVSAYV FLTWMHSIYS NAFSLVPAYF VLYLLLQLMR 
TYVKYGIDGP GQRGFVPPSW EEMFTSLFRK RDKNYRPIEP LELGLRPLPL RRRRTPESML 
STSPSVFEQF NYKVSTHIPK GKWLFRLLGF LPDRDDAQLS MEDDHLEFPF ASGKIYPKLS 
VKEALALRKG ETEKVTPEIP NASFQISTTK HGEVHSMMPR FDMEFDLLRK NSSGFKDYDF 
EEDYFAPRKA VAYTGKKAGK KAASTLTYAA SEITERTGLH NVVYPIRDGI GMGLNQVRDG 
VSSGVDMLNP RHHRRSSSCE PEILTSSFKS HQRSSDEDPN ELHTGENRWL RSRNSTALSW 
SFDLEKTNDI AVTNVTSVHS APPSENTSEP SSQNTNAVVP EQNIDVEGPS SGKKLTDDLD 
EIKDKMHELT WHRFDDKAYV LNKTGSLYFG DSKKPEKRRK TDVPRRLDKL LHLGQYSHSN 
PFVARVGLYV EPIIGSSYSF LCLFRAGFNV VTWRDPMLTF WLSLICGVLG LVLFIFPWRL 
FLFILGVLLV GPQNWAIRVL RERGHLPPAK LSRSAKHRLN PEDPQSSQKD EENHNSWKDQ 
PVFACHHRPN RSGPVGPPNV DPREVHRVVV PYSPLIYQRF YDWPPEPQYA QVKCDQTEDA 
RRRSTSNSPS SRGRGINRFR RRHRRRGVSL DRSVSSSPSP RKGTSSNETL WSSVGKKDT