| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50055 |
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| Symbol | |
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| ID | 7198746 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011694 |
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| Strand | - |
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| Start bp | 262996 |
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| End bp | 264939 |
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| Gene Length | 1944 bp |
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| Protein Length | 430 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184932 |
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| Protein GI | 219129514 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.578358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AGTCAGTTGT CGTAAAGCTT ATCTTGCTTC AGCTTCCGAA GACACTCCAT ATATACGGGG
TTAAGTAGAC TTATTTCAAA GCTCTTTGCA AAAACGGTCG GCGGCTTGTT CATAATGCGA
AGTTCATAAA TTGGTGTGAG CAGGAAGCGA AGACTTCAGC TCGATCGTTT GTACGCAATG
CGAACAGTGC CGATGGTAGG CCTCTGGAAC ACGATAAAAT GCTCTCCCAA AGTATATTTC
TTGGATAGTC TGTGATTATA AGATCCACCA TGACTGCGAT TCGTTTTGTG GGGTCCGCTC
TTTTCCTCAC GGCCTTTCTT GCTGTATGTG CTCATTCGCA AGCTGATTAT GGCGTCGACT
GTTCTTTCCC CATCCACAGC AAAGAGTTCA ACTGCGGAAA TCTTCTCGGC GACCGGAAGC
AAATCTACGA AGATTTTATG GAAGGTTGCA GAAAGCGCTA TAGTACGAGA GCATCTCGCT
GTGACTCAAC TGAAGACGAT CGGATCGAGA TGAGTTTGCG ACAACCTCAA TCAATGGTGG
TAAGTCAATC CACCACAATC TTGGGTCCTG GATTTATTGT TAACAGTGGA CGATCGTACT
CCTCATGAGC TTTCCACGAA ATCTCATCTC ACCATGAGTT TTTTACGCTT TGTCAACAAA
AAGAACTATA CGGAGACGGG CTTCAAAAAG ATACGCGCCC CAAATAGCGT GATGGACCTT
CTAAATGCTC ACTGGAAGCG AAATCGAGAT GGATTGTACG ATCGTGAAGA GATCTGGCCT
GCCGGAAGCA TTTACGTGAA CCATTGGGAA AGCCCAACAT ATATGTCGGC CGTGGAAGAC
ACCAATACTC GCGGAGGTGG ATATGCATTG AAAAAGGCCG TTTGGGATGC TGTCAAACCT
GTTGTTGAAG CATGGACTGG TATGGAACAA AAGCCAATCA GTATGTACGG TATCCGTGCA
TACACTGAGG GTGCCATCCT AAGCCCGCAC GTAGACCGCC TGCCATTGGT TAGCTCCTGT
ATCATCAATG TGGACCAAGA TGTTGATGAA GATTGGCCTC TTGAGGTATA TGACCGACAC
GACCGAGCCG TTAACATTAC CATGCAACCA GGTGACCTTG TCCTGTATGA ATCCGGATCC
TTAATGCATG GTCGTCCTTT TCCTTTGAAA GGTCGGTTCT ATGCAAATAT CTTCATCCAT
TTCGAACCGA CCGGACGAAA GTTAGGCGAC ACGTCTTTGG AATATTTGGA CGAACTCGAC
GACATCCTCC CTCCCTACCT TCTTGCCGGT TCTCCCGAAA GCGACAACTG GGCAAGGAAG
AATCCACATG GATGGAGCAA GCCATTGCCG TCTGCTCCAA TTCAGCAAAT AACTTCCCCG
GAGGGTCATC GCGCTGCGGC TATTGGAGAC CTTGCTCGAT TGTCTAAGCT TGCACAAACA
AACCGCAGGG CACTGCATGC CAAGGATGAG AATGGATGGC AGCCTCTCCA CGAAGCTGTA
CGAGCCGATA ACAAGGAGGC TGTTGAGCTT TTGATTAAGC ATGGTGCCAA CAAAGATGCT
CGGGTCGGAA AGAAAGGGGA AGGCGCTAGC GCGTTGAACC TAGCTTTAGA TTTTCTGAGC
GTTGGGGCGG ATACTGTCAA CTACTTGATG AGCATTGGCG CCCAAAACAT TGAACCTGAC
CTTTAAAAGG TGTTCTTGCC GATCCGACAA TAGCTTCTGC CATGGCCGCC GGAATTACGA
GTTGACCGAG ACTGAATTCT AACTGTAAGT GAGGATCAAG CAGAACTCTA TTGATGAAAA
TAATTGAAAT GTGAATAGCT CCCTGTGAGT AGGTTATAGA TGGCCTTATA GTTTGTATTG
TAGGCTTTGT TTAGTCTGTC ACGAGGATGT TTCCAAGAAG ATTTTTTTGG CAGATACCAA
GAACTCTGGA TAATAACAGT AGGA
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| Protein sequence | MTAIRFVGSA LFLTAFLAVC AHSQADYGVD CSFPIHSKEF NCGNLLGDRK QIYEDFMEGC
RKRYSTRASR CDSTEDDRIE MSLRQPQSMV NYTETGFKKI RAPNSVMDLL NAHWKRNRDG
LYDREEIWPA GSIYVNHWES PTYMSAVEDT NTRGGGYALK KAVWDAVKPV VEAWTGMEQK
PISMYGIRAY TEGAILSPHV DRLPLVSSCI INVDQDVDED WPLEVYDRHD RAVNITMQPG
DLVLYESGSL MHGRPFPLKG RFYANIFIHF EPTGRKLGDT SLEYLDELDD ILPPYLLAGS
PESDNWARKN PHGWSKPLPS APIQQITSPE GHRAAAIGDL ARLSKLAQTN RRALHAKDEN
GWQPLHEAVR ADNKEAVELL IKHGANKDAR VGKKGEGASA LNLALDFLSV GADTVNYLMS
IGAQNIEPDL
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