Gene PHATRDRAFT_50047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50047 
Symbol 
ID7198741 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand+ 
Start bp243714 
End bp244590 
Gene Length877 bp 
Protein Length124 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184844 
Protein GI219129330 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.183713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TAGTAATCCC CGTCTCTCCC TCTATCCTTT TTCTCCAGCA CGTATATCAT GAGTTTCATT 
GACAAGATGA AAAAGGCCGG CAAGAGCGTC GTGGACGCCG GTGCCAAGAC CATGCTCAAG 
GTCCGTCCGA GACAATGTGT GTGTGTGTGC GCGTCCGTAT TGGAACGGCT CGCGGCTACT 
CCAGGTCTCC ATAACGGTCA CGGATTGCTT CGATCCGATT CTGTTTCTCC TTCTACTTGC 
TTCGCGTTCG GAGTGTTTGT TCGCTTCAAT GTAGAGTTGC ACGCGGTACA CCGTATTCGC 
ACCTCCCAAC GTCCCAATGA TTCTGTACCA TTTGTCGTTA TGGACATTAT ACACTGACTC 
GTCGCTTATT TTCTTGTTGT GGGTGGGGGG CAACTACAAA AACATAATAA CAGACGGATA 
TTGCCTTTTT GAATCGTGAG ATCAAGTCTC GCAAACAGGC CTTTGGCATT GACATCTACG 
ATCTCATGGA ACGTTTGGAA ACGGAAGACT CCCTGACCGT GGCGGACAAG GAAAGCCAAA 
TCCGTGCGTC CTTTGACGCC GCCCGTAAGG ACATTGCCGT CATTCAGGCC AAGAAGGAAT 
GCAAATCGGA AGAAGTGACG GTTCTGGAGG CCGAAACGGA CGCTGCTAAC GCCAGCCAAG 
CCATTCCTCC CTCCAGTGGA ACCGTCGTGA CCAACCAGCA TCCCTCGGAA ATGTAACGCG 
CGGCAACGAT TCATCACTGG AGAAGTGGTG TACGCACCAC CGACAGGCAC ACACACACAC 
AGTCTCCCAC CTTTCCGTAC ACTCAAAGAA GGTATCGAGT GGGAGAAGGT AGTCACACAT 
ATCGTACCGT ATTAGTTTTT CGTTTTATTG TTTCGTC
 
Protein sequence
MSFIDKMKKA GKSVVDAGAK TMLKTDIAFL NREIKSRKQA FGIDIYDLME RLETEDSLTV 
ADKESQIRAS FDAARKDIAV IQAKKECKSE EVTVLEAETD AANASQAIPP SSGTVVTNQH 
PSEM