Gene PHATRDRAFT_49932 details

Gene Information

• Locus tag: PHATRDRAFT_49932
• ID: 7198629
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011693
• Strand: -
• Start bp: 333529
• End bp: 337027
• Gene Length: 3499 bp
• Protein Length: 1102 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002184783
• Protein GI: 219129200

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGGCTG CGAATTCCGC CAACGAGGCC GTGGTGGAAG TCGACGACGA TGCCGTTCGC 
TTCGAGGATT TGACCGTCGA CGACGATCTG CCGATTCTAG AACGGGTCGT CCGCTACAGT 
CGGTCGCAGA TTGCCCTACA GCGCCTAGTG CACGTTAAGA TGCTGGCGGA AACAGCCGAA 
ATTGTTGGGT ACGTGTGCAA CGAGCATTGT AGAAAGAACG TCAGGAATGG AAAATGCTCT 
AGAAAAGGGG AGAGAGGGTC TACGTTTGTA CTGTTGAAAG GGACGTGTCT TTCTGTAGAT 
ATGTATTGTT GCTTGTGTTA CTCACGACGC TCTTCTCTCC CCATTGATCA AACCCTCTAT 
CCTTTGAACC CGTTACAGGC AACGTTCGAC ACAAGAAGTG TTAATCCCCT TGCTGCGATC 
GCTGGTCAGC GATCCGGAAA GTATCATTCG GCAACACGTT TCTACACAGC TCGTCCCCGT 
CTGCATCGTT TGCATGGTCA AGAACGTCAG CAACGTCGCC GAACTCGTAC AAAACCCCGT 
CTTCTCTAAA GATTACGACG AAAAGGGTTA CACTCTCGTT ACCACAACCG TGCTCGGACA 
TATAAACACG CTCCTGGAGG ATTTTGATCT GGATGTCCGT AGAGCGGCCG CCGACGCTCT 
TTCGGGACTC GCTTTGCAAA TTCGACCCGC TGATGTTCCC CAGGCCTTGC TCCAAATCCC 
TCTCGCGCTC GCCGCAAAGT TACCGAAAAA TCCACACGCC AAGAAAAAGA CCGAAGCGGA 
TCAGCACGTT GAGGAATTGC GCATCACGGC GGGTAATCTG TTGGCCGAAC TTGGTGGTGC 
CGCCTCGGAA CACTCCACTA CCTTACTCGC ATCGTCCACG TACGTTTCTG GATTGATTCT 
CCCAGCCGTC CTGAAATTGT GTGACGACGT TTCCTTCCGT GTCCGACGAA GTGCGGCCCA 
AGCCTTGCCA CGCATTCTCG GAGCATGCTC GTTGAACGAT GTGGAGGAGA CTATTCTACC 
GGCGTTCGAT CAATTGAGTC GAGACGACTT GTATCGCGTT CGGAAATCCA CAGGCGAGTG 
TCTGGTGGAT ATGAGTAGAT CCATGATGTT ACTGGCGGCG AGTAACAAAA AGGCTGAAAG 
AACGCTTTAC AAATTAAGAC GCGAGACACT AATTCCTATT GCCGATCGCT TGATTCAAGA 
TTCGCATAAA ATGGTCCGTC AAGGTATGAT GCAGTTTCTG GGACCCTTCA TGGCTAGCTT 
TTATCCATAC CAGACGTCTG CTCTGCGCGA TTTATTGCCC GGCACTGTCG AATCGGACGG 
CAGCAATCAC ATGGGGATCG TGGCCCAATT CTTTCCGCAC GCCACATCCA TGGTGTCCCG 
TCTCAACTCG GCACAAAACA TTAGCATGTC GGCACCTACC CCGGTGAACG TACATTTGGA 
CGAAATTTTA CACCGTGTTC TATCCGAGAT GGATGTTTTG CACCAGGCAC TGCCGGCATT 
TTTGCAAGCC TCCCGCATGT CGGCGCTGTC ACTAGCCGCC GTCGCGACCC ACCGGAATCG 
TAACTTACCG GACTCGGAAG ACGTTGACGT ACTGATAGAC AAACTATTGG ATTACTTTGC 
CGCACTCGCA ATTGTATCGA CGGGCGACGA AAACACCGAC GCGGAAATGC GTGTATACTG 
TGCGTATAGC TTTCCCGCTC TTATATTGCT ACTGGGAGCG GACAATTGGG AGGGGGCGAT 
GCGTACATGC TTTTTTACAC TCATGAACCC GAACTATGCC AAAACTCAAC AACCGGAAGA 
AAAGCAGTCC GACCCGGCGG AAAATCTGAA CGTCGCCGAG CCACCCCTGC CAGTGAAACG 
CTGTTTGGCG AGTAGTTTAC ACACGGTTGC CAACATCCTG GGACCCGAGC TGGCCGCCTC 
CGATATTGTA CCTGTTCTGC AGGACTTCTT TTTGAAAGAT CCAGATGAAT CCGTACGACT 
GAACGTCATT CGCAACTTTC CAGCATTGTT GCAAGTGCTC TCCCCTTCTG ATCGCAAGGG 
CCCCTTTCTC ATGTGGAGCG AAATTGTCCG TGGTGAAGAG TTGCTGGGTA TCAAGAAGCG 
CAGTGCACAC AATCCGGTTG TGCTTAACTG GCGACAGCGT GATTATTTGG CGCGATCTCT 
GCCGGATCTG ATTGGTTTGG TGGAGCCGTC TCTGGTGCAC GAACATATCT GGCCCATTAT 
GAAAACGCTC TTAACCGATG CGGTCTCTAT AGTCCGAGAT GACGCCATTT GGTCGATTGC 
CATGATCCTT AAAGCTTATT GCTTGGAGTC ATTGCAGGCA TGGCCGAATG TGTCCAATTT 
TCGAGCTTTC GGTGCTCAAT CGTGTGCGGA AGTCATTGAT TGGTTGAAAG AAAGTATTCT 
CAAGCTGGGA GTACCTAGAG AAGCTCGTAT AAAACCCGTC AACTTTTCGG AGCGCCAGCT 
ATACTGTCGA ATTTGCGCCA CGCTAGGATT GGCCCTGCGC TTTAGTGAAC AGATTGAAGG 
GGACAAACAA GACCCAGTCT CGGTGTTGAG TGGCAAGTTT AAGACGTTTT TCTTCCCAAA 
GTCGAAAAAT CTGCAAGACG ACCTCCCAGG GCCGTATCAA GCCATGACCA AGTCGGAACA 
GAAACACCTT CGACGCCTTC TGCTGAACGA GCTATTGCCT CCAGCATTGG AAATGAAAGA 
AGATCGGATA TCTAACGTCC GCGTGTCTTT AATGAAAACT CTGCAACTCA TGCCAGCCGA 
AATTCGTGCA ACGCCTCTTG TCCAACCAGT TCTTCAGGGT TTGGTCGAGG AAGTGGAGAC 
ATGGGAAAAT TTTGCAATTT CTGATCAGCC AGTGCCCAAC CCGCTAAAGC AATCCGCATC 
ACAGGCTGCG CTGTATCAGC CCGCGCAACG CTCACTTGCC AGTGGTGCTG TGTCGCCACG 
AGCGCAACAG AGTGTCCCGG TGGATTTAGA TGCGGAGATG CCCGACGACC GACGGTCGTC 
TTCGGACGAC TCGAGTGCAT CAGCAGAGGA CGTTGCCGAA TCGTCAGATT GGAAGACGGT 
AGTGTTTCAA GCTGGACCGA TCGGCATGCA GCTGGAACCC ACTGCCGATG ATCGTGCTTG 
TCGGGTTTAT GGTTTTTTGG ATTCGGGTGA TGGAAAGCCG TCACCGGCGC GGCATTCGGG 
CAAGATTGAG TTGGGCGACG TCATCGTCAA GGTGAACGGT AAAGATGTAC ATTCCTACGA 
CGACACGATT GCGGTTCTCA AAGCAGGTGG CCGTCGGGAA ATCACTTTTC GACAGGGAAC 
AGCCGACGAC GATTACGACG ACGACGAAGA AGAAGAGAGT GTAGGAGGAT TTTCGTCTAC 
CGACGACGAA ACCGATCGAA AAGAACGGGA ACGCAAGGCA AAGAAGGAAG CCAAGAAGGC 
AAAAAAGGCC AAGAAGGAAA CAAAGAAGAA AAGCCGTGAC AAGAAAAAGG ACAAACGGAA 
AAAGGAGGAA ACAGGATGA 

 

Protein sequence

MEAANSANEA VVEVDDDAVR FEDLTVDDDL PILERVVRYS RSQIALQRLV HVKMLAETAE 
IVGQRSTQEV LIPLLRSLVS DPESIIRQHV STQLVPVCIV CMVKNVSNVA ELVQNPVFSK 
DYDEKGYTLV TTTVLGHINT LLEDFDLDVR RAAADALSGL ALQIRPADVP QALLQIPLAL 
AAKLPKNPHA KKKTEADQHV EELRITAGNL LAELGGAASE HSTTLLASST YVSGLILPAV 
LKLCDDVSFR VRRSAAQALP RILGACSLND VEETILPAFD QLSRDDLYRV RKSTGECLVD 
MSRSMMLLAA SNKKAERTLY KLRRETLIPI ADRLIQDSHK MVRQGMMQFL GPFMASFYPY 
QTSALRDLLP GTVESDGSNH MGIVAQFFPH ATSMVSRLNS AQNISMSAPT PVNVHLDEIL 
HRVLSEMDVL HQALPAFLQA SRMSALSLAA VATHRNRNLP DSEDVDVLID KLLDYFAALA 
IVSTGDENTD AEMRVYCAYS FPALILLLGA DNWEGAMRTC FFTLMNPNYA KTQQPEEKQS 
DPAENLNVAE PPLPVKRCLA SSLHTVANIL GPELAASDIV PVLQDFFLKD PDESVRLNVI 
RNFPALLQVL SPSDRKGPFL MWSEIVRGEE LLGIKKRSAH NPVVLNWRQR DYLARSLPDL 
IGLVEPSLVH EHIWPIMKTL LTDAVSIVRD DAIWSIAMIL KAYCLESLQA WPNVSNFRAF 
GAQSCAEVID WLKESILKLG VPREARIKPV NFSERQLYCR ICATLGLALR FSEQIEGDKQ 
DPVSVLSGKF KTFFFPKSKN LQDDLPGPYQ AMTKSEQKHL RRLLLNELLP PALEMKEDRI 
SNVRVSLMKT LQLMPAEIRA TPLVQPVLQG LVEEVETWEN FAISDQPVPN PLKQSASQAA 
LYQPAQRSLA SGAVSPRAQQ SVPVDLDAEM PDDRRSSSDD SSASAEDVAE SSDWKTVVFQ 
AGPIGMQLEP TADDRACRVY GFLDSGDGKP SPARHSGKIE LGDVIVKVNG KDVHSYDDTI 
AVLKAGGRRE ITFRQGTADD DYDDDEEEES VGGFSSTDDE TDRKERERKA KKEAKKAKKA 
KKETKKKSRD KKKDKRKKEE TG