Gene PHATRDRAFT_49911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49911 
Symbol 
ID7198531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011693 
Strand
Start bp270961 
End bp271862 
Gene Length902 bp 
Protein Length257 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184764 
Protein GI219129160 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACCTC ACACAGACGA CTACTGGAAA ACGACAGAGG CAGAAGAACG CTCCTACTAT 
TCCTACCAAC AACCACCCTC ACACCACTCA GAGCACAGCT CAGCTTTTGA ACGACACCCA
GCTTATCAAG ACTTTGAGCC TCCGAGGTAT CGTCAACCTG CTCCTCGGAG CTATCCCCAA
CCGCACCAGC AATATCAGCC GGCGAGCTGG TACGATCATT CCTACCACCA ACATCACCGC
TCCTATTACC AGCATGCCCA TCCACCCGCC TTCAATCAAG CGCACCATCC GGAGACACAC
GATCCTTCGT TGCAGTCGTC CCCGCCGGAG GTAGTGTACC TACAACGTGA TCGCAGCTCA
TCGCCTGGCT TGGTGTTTGA AATAAAGGGT ACCGACGTCC TCTGTGGTCG CGGCGCCCCT
ACAAACTGGC ATGAAGGCAA TCAATACTTT CGTCAGCTAG TCAACAAACA CCAGGCAGCC
TACTTGGCGG CAAAGCGTGT CGAGAAACCG GAAATTGCCA TACTCATCGT GCAATTGGTC
AAAGAGCGTG GCGGCCGCTT CCTGAAACGT ACCAAACGCC CAGGGCTTGG TCCGAGCGGG
CACTTTGGCT GGCAAGAGAT TGATGAGCAC CGTGCCTACG AAAAGGTCTG CCAAGCTTTG
CGCGAGGGTG CCCCAGATCT TCGTCGCAAA CTGGCCGTGA AGAAATTTTC CTCCCCTTGC
GTGGGCGAAC GCGGCGGAGA TGAGCATACA AGGGAGCACT CAGCTGAGGT GTAGGGGACT
AGACTCATTT CGGGACGCTT AAACGGGAAA ACAGACTACT GCTGATTATT CAAAAAACTC
TTGACCGCAG TCAGTAAAAT AAACTGGTCA CCAGTAATTT CAGCCAACCG TTATTTTTTT
CT
 
Protein sequence
MIPHTDDYWK TTEAEERSYY SYQQPPSHHS EHSSAFERHP AYQDFEPPRY RQPAPRSYPQ 
PHQQYQPASW YDHSYHQHHR SYYQHAHPPA FNQAHHPETH DPSLQSSPPE VVYLQRDRSS
SPGLVFEIKG TDVLCGRGAP TNWHEGNQYF RQLVNKHQAA YLAAKRVEKP EIAILIVQLV
KERGGRFLKR TKRPGLGPSG HFGWQEIDEH RAYEKVCQAL REGAPDLRRK LAVKKFSSPC
VGERGGDEHT REHSAEV