Gene PHATRDRAFT_49807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49807 
Symbol 
ID7198376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011692 
Strand
Start bp385843 
End bp386768 
Gene Length926 bp 
Protein Length302 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184610 
Protein GI219128837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.642974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGTATCCCTG ATTGATCATG AGCGCTTGGC TACTTTCGGC ATTGACACTT TCGTTGCTGC 
CTGCCTTTAG TATGTCTTTG GCAATTCCGA GAGTGACCGC TTTGTATCGA TACGCGGTCA
AGGGGTTGTC GGAAGATGTT CTCGACAGCG TCACCTTTGC GAACACGGGG GATACCTTTC
CCGACGATCG ACGATACGCC TTGCTCCAGC AATCCCGACG TGATCGATTC GACGGAAAGT
CGTGGTTGCA CAAGGAAAAC TTTCTGTGTG CCTTTACCGA ACCGGAACTG ATGGCGACCC
TCCAATCCTA CTATCGAGAA ACTACCGCGG GCGAAAAAAT ACTCACGATT GTGGATCGGG
CCTCGGGTGA TCCGCTCTTT ATGGGCAATC TCGCGACCGA AGCTGGTCGT GAGCGATTAG
GAGAAATGAT GTCCGAAACA TCGTCTCAGG ATGTAGTTTG CGTTACTGCG TCCGATCCGT
CCTCTCCACA GCACACTTTT CAGTTTGGCA ATACCTCGTC CGGCTTCAAG CAACGCGATG
GGGACACCCG AACGCTACAT ATTGTCAACG CACAGACGGT GCGTTCGTTG AGCGAGAAGA
TTGGGGTGGC GCTGGATCCG CGCCGCTTTC GACCCAACGT TGTGATCGAC GACGTAGACG
CATGGAGCGA ATTCGATTGG GTACGATCCA AAGCCAAGTT ACGGTGCATC AACAGTGGAT
TGGAGTTGGC CGTCATTGGT AAGACTGTCC GGTGTAAGGG CATTTCCGTG GACCCAAACG
ACTTAGGACA CGTGTTGGAT ATTCCTGAGC TCTTGATCAA GCACTTTCCC GAACACGGAC
CCTATCTGGG TGTCTACGCC GTAGTCGACG CCCCAGGAAA ATTGTCGACT GGTGACACTT
TCGAGATCTT GATGGAAGCA TCGTGA
 
Protein sequence
MSAWLLSALT LSLLPAFSMS LAIPRVTALY RYAVKGLSED VLDSVTFANT GDTFPDDRRY 
ALLQQSRRDR FDGKSWLHKE NFLCAFTEPE LMATLQSYYR ETTAGEKILT IVDRASGDPL
FMGNLATEAG RERLGEMMSE TSSQDVVCVT ASDPSSPQHT FQFGNTSSGF KQRDGDTRTL
HIVNAQTVRS LSEKIGVALD PRRFRPNVVI DDVDAWSEFD WVRSKAKLRC INSGLELAVI
GKTVRCKGIS VDPNDLGHVL DIPELLIKHF PEHGPYLGVY AVVDAPGKLS TGDTFEILME
AS