Gene PHATRDRAFT_49733 details

Gene Information

• Locus tag: PHATRDRAFT_49733
• ID: 7198428
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011692
• Strand: +
• Start bp: 93625
• End bp: 96041
• Gene Length: 2417 bp
• Protein Length: 310 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002184485
• Protein GI: 219128576

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.597636
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCAATAGTCG GAGGAATCCG AAACGACGCC GTCTTGGATA CGCCGAACAT TGCTTTCCTG 
TCTCCGTAGT ACACGCGAGC GGCCGGACTG GCCAACACTT CCACAGTCTG CGCTTGTCTC 
CGTCCGTATA CCGCCATCCA CGCCATACAA AAGAGAACTT CCTCCCCGTT CTTCCCGGTG 
CTCCAGTCTA AACCGCCTTC CATACCCACC GCCAAGTGCG GATGCCGGCC GTTGGCTTGG 
CGAAACTCGT TGTGAGCCGC CTGGGCCCGG TTCTGGGCAC CCCGCAGAGT TTCGTCGTCA 
CCAAACGGTT GATCCGGCAC GCCGCTAGCG ACGGTAAAGC TTTGAATGTC CAAGACGACG 
GTTGTATGCG GCTTGTCCTG GATCGCCTGT CGCAAAGCGC GTTCCACTGC CAGGACTTTG 
GACGGATTCG ACGACCCCAC TGCCACGCGC AGTATCGTCG TTGTTGACGA CGCCACGACC 
GTCGTGTCCG TGCCGTTCAT GGGACGGGAC ACGAATATGC ACCAGTGGAG AGTTACGGGT 
TGGTATTGCG GAGTGTCTTG CCTGCGGAAA CCGAAAAAAT CCCCGCTTAC CCTCCCAATG 
TGTTCCGACC GTTGACCTGG ATCTTCATTG GCCGCACTGC CGTCAGTCGG TGGGGGACCA 
GAGTTGGGAC AGACATCCTG TCGGAGTAGA GCCGCGATAT TTGGTATAGG AATGATACAA 
TATAACGGAG AATTCACTTA TCAGTCAGAC CGGAGGGTGA CGGGATTGCG ACATCGAGCC 
AATCCAGTAC AACAGCCCCC CATGTCGTTG TATCCCTGCA TGCGTACACA TCCATAAGAA 
CTTTACCATC GCATTCGTTC CGTTTCAAAA TTCTGTCCGA CTTGCCTTTT GCAAATCAAG 
CGTTCTTGCT ACGGTAGAAA GTGGTTTGCG CATCAGGACT AATGATGTGT GACCGAATTG 
ACGACTGTGA GGGAAACAAG GCTGGACCTG TTGTTCACAG TCAATCTTTT TAGAATGATG 
ATCTACTTAT GCAGACATCG ATGAAGGCAT TTTCACTTTT CAGTCTCTTG TGAGGTTGAC 
GTCGGATGTC CGTTGGCATG ACCCAGATAC CGAATGGTCG AGCTTGCTCG GAGCGCCATG 
CTGTGATCAA GGGTAAGGGG TTGTCTTTTT GGGCGCGTTT CTTTCGATGT CGGTACTTCC 
GGAAAGAAAT CTTTTGGAAT CCAGTCAAAA AAAGATACGA AACTTGATGG CATCCATTAC 
CGGTCGCACA CTCTCTTTAC ATTGGAAGTA AAAGCAGGCT CTTGGACGCA CCCGAGTCGA 
AAGACATACT CTTTCTTATC TCGTTACAAA GAACAACGCT GCATTGCTCG AAGCCCAACG 
GAGCTAGTAA TGACCTTGGC TAGCTTCATC TCGTCGGCGA ATCCTTCCGT CGCCGTTGCG 
GGTATCCGCC ACTCGGTTAC CTCCGTGGTT CCCCACGTGT TCCCCTCGGT GCTTCCAAAG 
ACTGCGTTGG TCGTGTCCAA GTCGTCAGCT GCGGTGGTGA ATGTCTTGCG GGCTGGTGCT 
GCGTTGACGG CGACGAAGGA CTACGGCGAT GTTGCCATTC AGTACTTTAC ATCGATACGG 
GTACCGGCAG CTCTGGTTGC CGGAAGTTCC TTGGCGGCTC TGTTTGCCCT CGTGGACGAG 
GCTAAAGTTG AGAGTATGGG CGAAGAAACA TCCCTGGAAC GCAAGCTGGT ACTGCTCTAT 
CACGTTTTGG TACTTTCTTC CTTTCTGCTT TCCATCAACG TCATTATTGT ATCGACGGCC 
ATGAGTAACG TGTTCCTACT AGGGGTCAAC AACCCGATGG CCACGTCAAC ATACGCGTTG 
CTCAAACGAG AATACGATTA CGAATTTGCC TTGACTAGCT GGTCTTTTAT GGTGCGTAAG 
ACGAGCCTGT GGTACGGCTG GCGACTACAT AGGCCTTTGC CCTTTTGACT GACCTTGCGT 
TTCGTTTCGT CATCGCGACC GACTAGACGA GCGTCTTTTC CTTTTTGAGT GGAGTCGCCG 
TCCGGGGTCT GATTCAATTC GAAATGTTCA CCAAACGAAG AAAGCGACAC GCTCTCTTGG 
CTATTTGCTC GGTCTCTTCC ATGGTGTTGC ATCTCATGGG ATTCGTGAAT CGGCGTTTAC 
CGCACTGGCC AAATATGTTT CGTATGACCG TGGATGTCAC GACCATGTTC GTACAGCGTT 
CCATACAAGG AGGAGCACCG TGTGAGCTTG CTTCGGTAAT ACTCATGTTG GGAGGCGTTG 
TGGCAGGCAT CTCGCTCTTT GTTGTACCGA CCCAGTACAC AGGGACGGCT CAGGATTACA 
AAACAATCAA CGACGAAGAA ACTCCGAAAA AGAAGAGTGC GATCCAAAAA TCACAGAGTA 
AACCAGCAAA AGCTTGA 

 

Protein sequence

MTLASFISSA NPSVAVAGIR HSVTSVVPHV FPSVLPKTAL VVSKSSAAVV NVLRAGAALT 
ATKDYGDVAI QYFTSIRVPA ALVAGSSLAA LFALVDEAKV ESMGEETSLE RKLVLLYHVL 
VLSSFLLSIN VIIVSTAMSN VFLLGVNNPM ATSTYALLKR EYDYEFALTS WSFMTSVFSF 
LSGVAVRGLI QFEMFTKRRK RHALLAICSV SSMVLHLMGF VNRRLPHWPN MFRMTVDVTT 
MFVQRSIQGG APCELASVIL MLGGVVAGIS LFVVPTQYTG TAQDYKTIND EETPKKKSAI 
QKSQSKPAKA