Gene PHATRDRAFT_49580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49580 
Symbol 
ID7198198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011691 
Strand
Start bp102545 
End bp103627 
Gene Length1083 bp 
Protein Length247 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184397 
Protein GI219128390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACAAAAATCA TGTTTCGGAA AAGTCTACTT GCGTGCTGTT GTCTGTTCTT GCAATATAAA 
TCCGCCTCCG CCTTTCGGGG ACGATTTCTA GCAAAGCGAT ATGCTACTGC CGCCGATAGC
ACTGTGCTGC AAGCTACGAA GGAGCGCAGG CCTTGGGACT TTGTGCGTTT TGTGACGCAA
TCTTCCAAAT TCGTCAGCAT TTTTCCTACT CGCACTCCGA CGCGTATGGT AAAACCCGGC
AGAGTGCTCT GGGATCCCAA GGGTGATGGC GAAAATGACT TCACGCTGGC TCCACTAGAT
GATGTTGTCA TGGGAGGAGC TTCGTCGTCC ACCTTCTCCT TCGGGCGCTG GAAAGGAACT
GTGACGGATG CGAACAATGG GGGATTTATT GGAATTCGAT CCACCCCGTC ATTCCTATTC
GACATGAGTG CCTGCGAAGG CATTGAAATC AAGCTGACAT CGGACGATAC ACAGAGGCGT
TTCAAATTCG GCCTTCGCGA CTCAAAAGAA TTTAATGGTA TAGTCTGGAC AGCCAGTGTG
GATGTCAGAG GCAGTAAAGC CGTTCGCGTG AATTTCAATA AATTGGTTCC AACCCTCTTT
GCCAGAACGG TTCCAAATTC GCCAACGTTC AAAAAGGACA ACGTGGTCGG GTTGCAACTG
ATCTATTCCA AGTTTGAATA CGATGGTGAA ATGAATCCGA ACTTTACGCT TGGCGACATC
GACGTTGCCG TTTCGGAAAT CAAGGCCTTT TAGGGATCGC GTCATTTCGT AAGCAATATT
GCATCATCTA TAAGTGCATA GAAGTTCTCG CTTTAATGTA TACGGCACCT AATCCGCGAT
GATACAAAAG GGGGAAATGG CCGTACCATG CTGCCGGCAC AAGAATTCAT TCGACCCGAT
CCCAAGAACT TTTTCAATGA TTCTCGTGAT CGTCAATTGA CTTTATGCAT GGAATGAATG
TATTGACTGT GAGACGAAGG TTGTCCATAG TTTGCTCAAA CGGACCATTT ACGTTGGCCT
TAAATTGCCG GTTGCCATGC CTTTCCACTT TGAAACAAAA ACTAAAATTT GAATTTACAA
TTT
 
Protein sequence
MFRKSLLACC CLFLQYKSAS AFRGRFLAKR YATAADSTVL QATKERRPWD FVRFVTQSSK 
FVSIFPTRTP TRMVKPGRVL WDPKGDGEND FTLAPLDDVV MGGASSSTFS FGRWKGTVTD
ANNGGFIGIR STPSFLFDMS ACEGIEIKLT SDDTQRRFKF GLRDSKEFNG IVWTASVDVR
GSKAVRVNFN KLVPTLFART VPNSPTFKKD NVVGLQLIYS KFEYDGEMNP NFTLGDIDVA
VSEIKAF