Gene PHATRDRAFT_49526 details

Gene Information

• Locus tag: PHATRDRAFT_49526
• ID: 7195857
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011690
• Strand: -
• Start bp: 512484
• End bp: 519542
• Gene Length: 7059 bp
• Protein Length: 1633 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002184267
• Protein GI: 219128116

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAGCGTATTG CGAACGATAC CTTCCTTCCG TTACCCAAGT AAGCAATTCG TGTTCGTCCT 
GTGTGAATGT GCATGTGTGT TTGTATGTGT TTGTTAGTGT GTGTATGGGG GGAGGGAGAG 
GAAAGTAAGC ACAAGGGAGG CGCCTTCCAT CGCAAAGAAC GGGTCAAAGG GAGCGCCAGA 
GTTCGAATGT GTGAGAAAAA GAGAGAGATG CCGAGCATTC GTACAAACTA ATGTTCGGTT 
GCTTGGTGGA AGCACCAAGG GTTGCACGCA GTGCTGCCGT GCTTTGCTGT AGTTCTATTT 
GGTACACGGC GCACGTTTGC CACCCGACAC TATATCTCAC GCAAGAGCAC CTCTTTGCTT 
GCTTGTTCGT TTCTGTTAGG GATGACCACG GCGCCGCTCA CTGCAGCTCA ATCTTCTCCC 
TTGACTATAG CCAATACGAC GACAACGACA ATCAATAGCA AGCCTCTCGT GGATTCTCTT 
ACCAATACTG TTCCAGAGAC AGTCCAATCC TCTGGACGAG ACGGTAATTC CTCAAACAGT 
GAGACCAACA AAAGCAACAG CAACAGGACT CCCACTAAAT TTGCTGCGTT GTCCGAAGTG 
CCGCATCGAC GCTCGGCATT GGTGTCTACG GCTCACTCCG TCACGTCGAA ATCCAAACAG 
AATTCTACTC CACCGGTAGA CATGGCAACG GCGTCCGGAT CAGCCAGTCA AGGCTCGCAC 
GGCGAAAACA CGGGACGCTG GACCGCGGAA GAACACCGCT TGTTCTTACA GGGGTTGGAA 
CAGCATGGCA AGGGATGGAA GAAAATCGCG TCGCTCATCA AGTCGCGAAC CGTCGTACAG 
ATTCGGACGC ACGCCCAGAA GTACTTTCAG AAATTGGCCA AGGCTCGCCA AAATGGGGAA 
GAAGGCGATG TCGCCATGGA AGGTCGCGGT GGCGTGGCTT CCATTACCTC CGTCTCGACA 
ACTGCTGTTT TACCCAAGCG ACGTCGCCAG ACAACCGGAA CAAAACGCAA GGCCATTCAA 
TCCGTCGTGG CTTCCGCCCA GCGGCAAGGC AAGAAACTTG CCGCCGCAAA GACGAATCCT 
ACTCGACACC ATCCCTTGCC GCCGCCCCTA CCAACGGTCG CCCCCGCACT CGCGCATTAC 
ACTCTCCCCA GTACTGCGAT GATGGCCAAA AACGGCACCG CAGTGAAGGA AGAATTCGTC 
TCGCCCACCA ATCTTTCAGG ACCGGCCCTA GAAGATTCAT TGTAAGTCGT CCCCACCGTC 
GCATCGTGGT AGCCTTTCGT CTTCGTGGGT TGGAAAGCTG ACCCATTCCA TTCTCTTCTT 
TCGCAGATTC CGCTTCTTAA CCCCGGTTCC GGTATCGGAA CCACCGCTCA ACGAAGTAGC 
TCGTCAAGCC GGTGCCAACC CGATTTCTCT CCCCACCGAC AACCCAAGCT CTATTCCAAC 
GGTGGGTGCA GGAGAAATCT CGCCCACGGG AGTTTCAGAT TTGATGCTTT ACCCCTCGTG 
GACAGACTCA AAAGAGCCAC CTTCTTGGTA CAGCAAGGGC GCCGACATTG ACGCATTGCT 
CGATATGGGG GATTCGTTGG ACTGGTTGGA CGACACGGGG GATTTGAACG AGTCATATGT 
ACCACCCGTC GTGGACACAG CAATGGCCGC TCCAGAACCG CACACGACCT TTCACAGGTA 
CTCCGATCTG GGACATTCAA AGGGACTTCA CAGTACCAGT GTGACGTCTC TGCCACATGT 
CGATTCCAAC GCAAATGTGG AATCCGTTGT GCCGCCACTT CCCTCCATAT TCGATGGAGC 
CCCCGACTCG GGAGAGCATC TTGAGACCAC GGAAGGGATG GTACCTTCCA ACAGTACTTC 
TCACTTGGCG GATGAAATCG ACGACAGTGA AGGCATACAC GAACACCTAC AAGTATTTGA 
CAGTCCTTTG GAGGAGAACG ACTTCGTATN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNN NNNNNNNNNN NNNNTACTGG GGCGACTCTT CAGTTCTTTA CCAAACGATA 
GAAAGCCCAA GCATCGGATC TCTCGCACAA ACACACGCAC TCGTTTACGG CCTGTCCGCT 
TCGACTCACC ATGGGCACGA TAGTATCTAC AGTGGGTCGG AGCGCAGAGA CAGATTTTTT 
CGTCACCGAG TCTCTACAGT TCCTACTGTC TTGGAACGAG GGACCAAGAC GGCAAACGCG 
GCGGATCCAT GATCCAACAC TCCTTGACGG AATTGACAGT AACGAGAATA TTCTCGACAC 
GACAGGTACA ACTTGCTCGG TTCTGAATAA TATTGTTCGT GATACAGTTA CTGTTAGTTC 
GGGTAGTTCG GGTAGCATTG GTACAGTGCA ATAGATACAT ACAATTGCGT TCGAATAACC 
CTATCCTCTA CGTAGGTCTC TCACGATTGT GGTTCGTGTC TGGAATGTAG ACTTGACTGT 
TCGTAGTATT GGTAGAGGGA ACTTGGTACC AATCAATACT CTAGTAGTAG TGGTAGTGGT 
AGTAGGGATG GGCGCGAACC GGACCGACGG GCGTGAGTTC GAAAAATCCC TCTCTCTGTT 
GGGTGACTCT TCCCATTCCT TCCAACGTTA ACCACAACAA CAACAACAAC GCTGTATCTG 
TATTGCTGGT TGGATACGCA ACTACTACTA CTACCACACG TAGTCGCCCC CATCACAATG 
CCAACGACCA ATTCGCCAGT CGAAAGCCGA ACGTTGTCGT GGACGGATCT CGGGTTGGAC 
ACGGACGAAG ATCACCCGCG TCGTTTGTTG CGTGTGCGGG ACGACGTGAT TGCCTACGGC 
GGCGACGAAG GCACACTGGT ACGCTTACCT TTCGTCACAA CGAGCAACGC CCAAAATGCC 
GACACGGGGT CCACGCGACC CTTGGCCGTG CGTCGCTTTG ATGAAGACGC CATACGTGCC 
GTCGCAGTCT CGGACGACGG AACCCGCGTT GCCGTCGGAA CGGATAGCGG TGCCACTCTT 
TTCTACCGTT ACGAGTTGGA TGGACACGTA GTAGACGCAC CTGGAAAGGG GCTCGTCTCC 
CGACACGGAT TTGTCACGCA CGACAGTGAC GACAACAACA ACAACAACAA CAACTCCCAC 
CAGAAACCCT CGGCAGACTT GTTTGGATCG CAGCCCGACG CCCTCGCCTT TGTCCCACAG 
CAACGTCCCG GGGAAGTCGT CCGTCACGGA CCCGTCTTTG ACGCTCCTGT ACGGCAACTC 
CTCTTTCTCC CCGACTCGCA TTTCCTCGCC ATTGCCACGG AAGCCGGATT GGCCGTTGTT 
TCCACCGATA CCGACAGCGG CATTGGTGGT GGCAGTCTGG ACACTAACCA CAACGAGAAC 
GTCAACCACC ACAACGTCAA ATACCTCCAC CGGGAAGCCC AAACGGCACA CGACGAATCC 
GGCATACGCG GACTCGCCCT CTGGCAAGCA AAGGACTGTC GTATACTCTC CTCACTCGCC 
ATGGACGGGC GTCTCTGTCA CTGGGATGTC TCTGCTCCCA CTCCCACACT CTGGAAACTA 
CTGCACCGCG AGACAGTACC GACCGTTACC AAGCCCGACC TGGGCGAAAT GCTCGGTGCC 
GATGCCTGGG ATCGATCCAC CATCCCCGTC GCCCATTCCC ACGAAAGCAT ACTCTTTTTG 
CCCGGAGAAA CCTACGTACA GGCGCGTCGC TACCGCAACC ACACCTGGGA ACTCCTACAG 
TCCCCTACCG GGGCCACCAA TACTACCGAC AAAGTACAGG GACACATTGA AGCCATTGTC 
GCCATGGCCC CGGCACCCAA CCCTCGAGAT CCGTACCTCG TCACCAGTGG ACGCGACGGA 
CGAGTCGTCC TCTGGAAACT ACAGTACTCT CATCACGACA ACAACAACAA CGACAACAAT 
CCAAACGACA ATGGTGACGG GCACATTGTC TTTCAAAAAC AAATCCTCCA GACGGATTCC 
GCCCCAACTC ATTTGTTGTG GACACTGGAC CAACCGACGC AAACGGAACG TCTCGACATG 
GTGACCGCCG ACGGACACTG GACTACTCTG GTAGGACGCG ACCAGATTGC TCCGGCCTGT 
CCAACCACTG CAGTGACCCA AGAGATCTCC CTCCCACACC GCCAATCAGC CGATTCCGTG 
CGGGAAAAAG AGAAGGAACA TGACGCAGAC TCGGACGACA GCGTTGATGA CTTTTCTTCG 
AACAAACCTT CCACACACCA AAAGAATCCG TTTGTGGACG ACGAGGCGGA GGACGACAAC 
GATGACGATA CGCTCGATAC GGCCTCGCGT GGAAAACTGG AGACGACCTC ACCAACGGAC 
AAGCGCGCCT CCAATCTTAA CAGCAGCGCT CTCGAAGAAC ACCACAATGA TCTAGACGAC 
GACTCCATCG GTGACGATGA CGACTCCTTC CACAACATTC CGACTCTCAC CACGCGACAT 
TCCGATTCGA TCCAGTGGCC TGAACCACAA CCCGCCTTTG GTCCTTCTTC CACATCGCTT 
GAATTGACTC GCCGCTTTTT GTGCTGGAAT CACATTGGGT CCGTTACGTT TCTTCGAGGA 
CAGGCCGGCA TCAACCGCAG CACGATCGAC ATTCACTTTA CGGACTCGGC ATTTCGTCGG 
CCCGTTTCCT TCACCGATAA TATGGGCTTC ATTCTGGGGT CCCTGGGGGA AGACGGCGGA 
ATATTCGCCA CCGACTTGGC GGAAGACGAG GATATTGATG AGGAGGACGA CGATATGGAC 
GGCTTGAACG TGTCGGCTGC TACCAAGGCC GCCGTCAAAC GTTCGCGCAA GGGTCCTTCG 
AACAAACCGA CCGGGTCGAG CATTTACTTT CATCGCTTCG AAACGTTCGG ATCCTTACGC 
GACAAGGATT GGTACTTGAC GCTCCCAGAT GGGGAGCGGG CTTTGGGGTG TGCGTCCGGT 
GAAGGATGGG CCGCCGTCGT AACGAGTCGC CGTTTCTTGC GGCTCTTTTC TTCGGGCGGC 
AATCAAGGAG AGGTGCTTTG GCTGAACGGC CACCCCGTCA CCATGGCTGG ACGGGGACGG 
TTCGTCGCGG TGGTATATCA CGAAAGTACA CCGTTACCAG ATGGAACACA AAAACTCGGA 
TACTTGGTGT TGGATGCGAT GGCGAATCGC GTAGTTGCCA AGGGGCCAGT GTCATGTATT 
AGCGGTGCAT CGACTCTTTC ATGGTTGGGG TTCAGCAATG ATGGATCTCT GCTGGCCATG 
GATTCGGATG GTATGCTGTC AATGTTGGTT TGCGCATCAT CCTTGGATGC GGAGGGACCG 
ACGGAAAAAC ACTGGGAATG GATGCCAATG CTGGACACGG TGGGGTTACG TAAATCCCGG 
GACGATTCCT TCTGGCCGGT CACAGTTTAT GACGGAAAGT TGGTGTGCGT CCCGCTCAAG 
GGTGGGATGA AGCATCCTGA TGCGGTGCGC CGTCCCGTCA CGGCCGCTCT CGGCTTTCGT 
CTTCCCCTGG CCCGGGGTCC TTTGACCAAG ACGCACACGT TGGAAGAGCT TGCGGTGCGC 
GCCGCGATTG CGCTAGGGCA GAAAAAGGCA ATTCACGAGA TTAGCCGGGA AGGCGACGAG 
GACGACGAGG ACTTTGAAAA AGAATACCGT TCCCTTTCGG CCCAAGTGGT ACGTTATCAT 
CGTTTTTGTG GGTGTTTGTG TGAATGACGT GCGAGGGTGT GCAGGGGAGA GGCCATCCAC 
GCTACACTGA TTGTCCGTCT CTAATAAGCT TTGTACGGTG TGCTTTGGCG ATTTCAACAG 
GACAAGGTCA CGCTAAAAAT GTTTGCAGCA ATCGCGGAAG CCGGTAAATT GGAGCGCGCT 
TTGGATTTGG TGGAGCGTTT GCATTTGGAA AAGAGCTACG ACTTGGCCAT GACGATTGGC 
GACCGGCACC GCAAACTTGT CGATTTGATC GAAGAGGCCA AGGATCGCAA GTTTGGAGAT 
CCGGGATCGC ACCAAGCCGA GTTTACGACC AAAGCGGAAT CCCCGAACTA TCAACGCCCC 
CGCATCTCTC CAGATTCGGC TGGGGCAAAA CGCAGTCTTG ACGATGAGGA CGAGGACGTC 
CGAAGCCGTC TCGTGCGTCG CAAACCAACG TTTGCCTAA 

 

Protein sequence

MTTAPLTAAQ SSPLTIANTT TTTINSKPLV DSLTNTVPET VQSSGRDGNS SNSETNKSNS 
NRTPTKFAAL SEVPHRRSAL VSTAHSVTSK SKQNSTPPVD MATASGSASQ GSHGENTGRW 
TAEEHRLFLQ GLEQHGKGWK KIASLIKSRT VVQIRTHAQK YFQKLAKARQ NGEEGDVAME 
GRGGVASITS VSTTAVLPKR RRQTTGTKRK AIQSVVASAQ RQGKKLAAAK TNPTRHHPLP 
PPLPTVAPAL AHYTLPSTAM MAKNGTAVKE EFVSPTNLSG PALEDSLFRF LTPVPVSEPP 
LNEVARQAGA NPISLPTDNP SSIPTVGAGE ISPTGVSDLM LYPSWTDSKE PPSWYSKGAD 
IDALLDMGDS LDWLDDTGDL NESYVPPVVD TAMAAPEPHT TFHRYSDLGH SKGLHSTSVT 
SLPHVDSNAN VESVVPPLPS IFDGAPDSGE HLETTEGMKA QASDLSHKHT HSFTACPLRL 
TMGTIVSTVG RSAETDFFVT ESLQFLLSWN EGPRRQTRRI HDPTLLDGID SNENILDTTV 
APITMPTTNS PVESRTLSWT DLGLDTDEDH PRRLLRVRDD VIAYGGDEGT LVRLPFVTTS 
NAQNADTGST RPLAVRRFDE DAIRAVAVSD DGTRVAVGTD SGATLFYRYE LDGHVVDAPG 
KGLVSRHGFV THDSDDNNNN NNNSHQKPSA DLFGSQPDAL AFVPQQRPGE VVRHGPVFDA 
PVRQLLFLPD SHFLAIATEA GLAVVSTDTD SGIGGGSLDT NHNENVNHHN VKYLHREAQT 
AHDESGIRGL ALWQAKDCRI LSSLAMDGRL CHWDVSAPTP TLWKLLHRET VPTVTKPDLG 
EMLGADAWDR STIPVAHSHE SILFLPGETY VQARRYRNHT WELLQSPTGA TNTTDKVQGH 
IEAIVAMAPA PNPRDPYLVT SGRDGRVVLW KLQYSHHDNN NNDNNPNDNG DGHIVFQKQI 
LQTDSAPTHL LWTLDQPTQT ERLDMVTADG HWTTLVGRDQ IAPACPTTAV TQEISLPHRQ 
SADSVREKEK EHDADSDDSV DDFSSNKPST HQKNPFVDDE AEDDNDDDTL DTASRGKLET 
TSPTDKRASN LNSSALEEHH NDLDDDSIGD DDDSFHNIPT LTTRHSDSIQ WPEPQPAFGP 
SSTSLELTRR FLCWNHIGSV TFLRGQAGIN RSTIDIHFTD SAFRRPVSFT DNMGFILGSL 
GEDGGIFATD LAEDEDIDEE DDDMDGLNVS AATKAAVKRS RKGPSNKPTG SSIYFHRFET 
FGSLRDKDWY LTLPDGERAL GCASGEGWAA VVTSRRFLRL FSSGGNQGEV LWLNGHPVTM 
AGRGRFVAVV YHESTPLPDG TQKLGYLVLD AMANRVVAKG PVSCISGAST LSWLGFSNDG 
SLLAMDSDGM LSMLVCASSL DAEGPTEKHW EWMPMLDTVG LRKSRDDSFW PVTVYDGKLV 
CVPLKGGMKH PDAVRRPVTA ALGFRLPLAR GPLTKTHTLE ELAVRAAIAL GQKKAIHEIS 
REGDEDDEDF EKEYRSLSAQ VDKVTLKMFA AIAEAGKLER ALDLVERLHL EKSYDLAMTI 
GDRHRKLVDL IEEAKDRKFG DPGSHQAEFT TKAESPNYQR PRISPDSAGA KRSLDDEDED 
VRSRLVRRKP TFA