Gene PHATRDRAFT_49525 details

Gene Information

• Locus tag: PHATRDRAFT_49525
• ID: 7195742
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011690
• Strand: -
• Start bp: 509345
• End bp: 511601
• Gene Length: 2257 bp
• Protein Length: 512 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002184266
• Protein GI: 219128113

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0165471
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGCATTCAGC GTATTGCGAA CGATACCTTC CTTCCGTTAC CCAAGTAAGC AATTCGTGTT 
CGTCCTGTGT GAATGTGCAT GTGTGTTTGT ATGTGTTTGT TAGTGTGTGT ATGGGGGGAG 
GGAGAGGAAA GTAAGCACAA GGGAGGCGCC TTCCATCGCA AAGAACGGGT CAAAGGGAGC 
GCCAGAGTTC GAATGTGTGA GAAAAAGAGA GAGATGCCGA GCATTCGTAC AAACTAATGT 
TCGGTTGCTT GGTGGAAGCA CCAAGGGTTG CACGCAGTGC TGCCGTGCTT TGCTGTAGTT 
CTATTTGGTA CACGGCGCAC GTTTGCCACC CGACACTATA TCTCACGCAA GAGCACCTCT 
TTGCTTGCTT GTTCGTTACT GTTAGGGATG ACCACGGCGC CACTCACTGC AGCTCAATCT 
TCTCCCTTGA CTATTGCCAA TACGACGACA ACGACAATCA ATAGCAAGCC TCTCGTGGAT 
TCTCTTACCA ATACAGTTCC AGAGACAGTC CAATTCTCTG GACGAGACGG TAATTCCTCA 
AACAGTGAGA CCAACAAAAG CAACAGCAAC AGGACTCCCA CTAAATTTCC TGCGTTGTCC 
GAAGTGTCGC ATCGACGCTC GGCATCGGTG TCTACGGCTC ACTCCGTCAC GTCGAAATCC 
AAACAGAATT CTACTCCACC GGTAGACATG GCAACGGCGT CCGGATCAGC CAGTCAAGGC 
TCGCACGGCG AAAACACGGG ACGCTGGACC GCGGAAGAAC ACCGCTTGTT CTTACAGGGG 
TTGGAACAGC ATGGCAAGGG ATGGAAGAAA ATCGCGTCGC TCATCAAGTC GCGAACCGTC 
GTACAGATTC GGACGCACGC CCAGAAGTAC TTTCAGAAAT TGGCCAAGGC TCGCCAAAAT 
GGGGAAGAAG GCGATGTCGC CATGGAAGGT CGCGGTGGCG TGGCTTCCAT TACCTCCGTC 
TCGACAACTG CTGTTTTACC CAAGCGACGT CGCCAGACAA CCGGAACAAA ACGCAAGGCC 
ATTCAATCCG TCGTGGCTTC CGCCCAGCGG CAAGGCAAGA AACTTGCCGC CGCAAAGACG 
AATCCTACTC GACACCATCC CTTGCCGCCG CCCCTACCAA CGGTCGCCCC CGCACTCGCG 
CATTACACTC TCCCCAGTAC TGCGATGATG GCCAAAAACG GCACCGCAGT GAAGGAAGAA 
TACGTCTCGC CCACCAATCT TTCAGGACCG GCCCTAGAAG ATTCATTGTA AGTCGTCCCC 
ACCGTCGCAT CGTGGTAGCC TTTCGTCTTC GTGGGTTGGA AAGCTGACCC ATTCCATTCT 
CTTCTTTCGC AGATTCCGCT TCTTAACCCC GCTTCCGGTA TCGGAACCAC CGCTCAACGA 
AGTAGCTCGT CAAGCCGGTG CCAACCCCAT TTCTCTCCCC ACCGACAACC CAAGCTCTAT 
TCCAACGGTG GGTGCAGGAG AAATCTCGCC CACGGGAGTT TCGGATTTGA TGCTTTACCC 
CTCGTGGACA GACTCAAAAG AGCCACCTTC TTGGTACAGC AAGGGCGCCG ACATTGACGC 
ATTGCTCGAT ATGGGGGATT CGTTGGACTG GTTGGACGAC ACGGGGGATT TGAACGAGTC 
ATATGTACCA CCCGTCGTGG ACACAGCAAT GGCCGCTCCA GAACCGCACA CGACCTTTCA 
CAGGTACTCC GATCTGGGAC ATTCAAAGGG ACTTCACAGT ACCAGTGTGA CGTCTCTGCC 
ACATGTCGAT TCCAACGCAA ATGTGGAATC CGTTGTGCCG CCACTTCCCT CCATATTCGA 
TGGAGCCCCC GACTCGGGAG AGCATCTTGA GACCACGGAA GGGATGGTAC CTTCCAACAG 
TACTTCTCAC TTGGCGGATG AAATCGACGA CAGTGAAGGC ATACACGAAC ACCTACAAGT 
ATTTGACAGT CCTTTGGAGG AGAACGACTT CGTATCGGCC ATCCTCGAAG AAGACACGAT 
TGATGTTACA GCAGCTCTAG CAGCGAGCTA AAGAGCGGGA CGGCTCTGTT TGTACCACCA 
CGATGCATAC TGCCAAAAAG TTGTATCGAC GTACCCACGC GCATGCGTAA CGTGTTCACT 
CTTGAAAGTT CTGGGAAACC GCCATCACGC TCCCCCCGTT TCATCCCATA TTATCTCGCA 
CCAAATACAC AATCGAAACA ATCACCGTCA TGGAATTTCA TTTCATGACG GCGGCTTTTA 
TCTTCTTCCT TGTAATAAAA TTGCCTTAAT TTTGTTC 

 

Protein sequence

MTTAPLTAAQ SSPLTIANTT TTTINSKPLV DSLTNTVPET VQFSGRDGNS SNSETNKSNS 
NRTPTKFPAL SEVSHRRSAS VSTAHSVTSK SKQNSTPPVD MATASGSASQ GSHGENTGRW 
TAEEHRLFLQ GLEQHGKGWK KIASLIKSRT VVQIRTHAQK YFQKLAKARQ NGEEGDVAME 
GRGGVASITS VSTTAVLPKR RRQTTGTKRK AIQSVVASAQ RQGKKLAAAK TNPTRHHPLP 
PPLPTVAPAL AHYTLPSTAM MAKNGTAVKE EYVSPTNLSG PALEDSLFRF LTPLPVSEPP 
LNEVARQAGA NPISLPTDNP SSIPTVGAGE ISPTGVSDLM LYPSWTDSKE PPSWYSKGAD 
IDALLDMGDS LDWLDDTGDL NESYVPPVVD TAMAAPEPHT TFHRYSDLGH SKGLHSTSVT 
SLPHVDSNAN VESVVPPLPS IFDGAPDSGE HLETTEGMVP SNSTSHLADE IDDSEGIHEH 
LQVFDSPLEE NDFVSAILEE DTIDVTAALA AS