| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49500 |
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| Symbol | |
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| ID | 7195840 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011690 |
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| Strand | - |
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| Start bp | 424978 |
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| End bp | 428197 |
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| Gene Length | 3220 bp |
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| Protein Length | 1011 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184250 |
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| Protein GI | 219128080 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.268799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAGGAAGCTA CTGCAGATCC TTTCGCCATG GGAATGACAA TGCTACCGCA CATTCCTGTG
CATAACAGGA ATACGGAGTT CCTATCGTAG TCACATGGTC GACGGACGAG AGGATGGTTT
ATCTACAGGG TCCGTCGGAG CAAGCGGCAA TCGTTTGGGA TCCTTCCCTG ATCCACCAAC
GTTCCGAGAC CGCTGTATAC TGGGATGATG ACATGCTTCA ACCCTGGGTA AAGCGCCACG
CATCCCAGCC GTCACTGAAA TTTCTGTCGT ATCATGCCTG TCAGGAAATC CATTGTTGTA
TAGTGAACAT TGTTCGTCGG ACGCTTGAGG ATTTACTACA GAAAGTAGGA GACGATTGTG
CTATGGAAAG AAGCCAAAGC GAAATACATC CATTGTCGGT TCCGGTCGCC GTAGCGATTC
CGGAAGGGAT TCTACTGCCA ATAGCGATCG AAGCCGTCTG CTGCTTGAAC GAGCCTTTTT
TTATTGGAAA CCGTTCGTGC TCTGTCGTTT TGGTTCCTTT GGAACCAACC GAAGGCCGCG
AGCGACTCCG GGACATGATT TGGGATTGTC GCCCCGCCTT AATTCTCACA ACGTCCGTCT
GCGACACCGA TCGTCTCAAT AACATAGTGT CGACGGATTG CCGACCCAAT GCATCCGTGG
CGGATGAGGG TACAGCTACA TTGTCGCACC CCGCTCTTTA CCGCGCCAAA TCGATTCAGT
TTCTCAATTT GCAACAACAT ATATTGGACT CGGTCGGTGA CGGCAACGAG AAAGCACACG
CCGCTTCTAC AGATCTTCCG TCCGAAAGAG TCACGGAATC TCTGGATCGT ATTTCCCATA
TTGTTTATAC CAGTGGAAGT ACTGGGGCTC CCAAAGGCTG TGTTTCGTCA ATTCGGGCTT
TGCGTTCCTA CCTTTCTTCA AAAAATACCG TACACAACGT GCTTACCGCG TCAACAGTCT
TATTGGCCAG CACCATTTCA TTCGATCCCT GCTTTTCCGA CATTTTGGCC ACTTTTCAGA
TTGGTGCAAC CCTAGCGATT GCGCCAAGAC GCACGTTACG GGAATCGCTC ACGCACGTAT
TGCACTCGCT CCAAATTTCT CACGTCTTGT GTACACCAAC CTTGTGGAGT ACCCTGGCCT
TGACAGGGAC CCGGCCAGCT GATCTTCCCA GCCTCCGCAT GATTGCCCTG GGTGGCGAAC
CTATTCCACT AGCCATTGTT CAGGCCTGGG CTCGTGCTTT GCCGGATGAT CCCGTACACT
GTCGTTTACT GGCCACGTAT GGAGTGACGG AAGCTTGTGT ATACCAATCA GCCGGAGAAG
TATTCCGGTT GGACTGTGGA CAGTCAAAGG GGCAAGATGT TGGTTTATTG CTCCCGGGAA
TGCGCGTTTC TATTTGTGAC GAATCGATTC AGGAAAGCTT GACCGAGGTT TTGCCGGCAG
ACATTGCCGT TGGCGAGGTA GTTTTGTCCG GTAGCCAGCT TGACAGCGTT TGCTCGTATT
TGAACCGTCC CGCACTCTCG ATCTCAAAAT ATCTGAAGTC AGAACGTCAT TGGCATTACC
GTACAGGTGA TCGTGGATAC ATTGACAGCA AAACCTTACG GTTACACATC ACAGGGAGAA
TTAATGGTGA AGACGGCATG GTAAAGATCA ATGGTATTCG AATCGAATTG GGTGAAATAG
AAAACGCGTT GGTCGGCTCA ACTGCAGCCC TCGCTACAGT TTTGGACGCC ATGGTAGTTC
CTCATGTACA CTGCATAACA GCCACGGATC TCGTTGCCTA CGTTGTCTTG GGAGGAGACT
GTCGACAGGA AATGGGTGTA AAGGGCACGA TATCTTCGGA TGGAGTACTA CTCCCTCCAT
GCCCATTGAT GGTTTTGTTA CGACATCGTT GCAAACTGAA AGCAAGAATG ATTCCGGCAT
TTTTTATTAT AATTCCAAGA ACACCGCTGT CGCCGACCGG AAAACGACAT CGTGCTGGAT
TGCCGCCTCT TGAGGCTGCT GTGCCGTTCT TTTCCATACT GAGACAGGGA GTAGATGCTA
TCTCCCAGTA CCTCTCGGTG CGTACGGCAA GTCCGGTTCC ATGGTTGCGA GTCACATCGT
AGACTGTTTG AATCTACAAT ACAACCAGCA AGCCTTGCTC ACGACGGACG CATCGTTTGC
CATGCTCGGA GGAGACTCGC TAGCTGCCAC TCGCGTTGTT CGTGCGCTGT ATGCCGCACA
TCACTGCGTC CACAACAGTC GCCATCTGGG AGGAGAGTAT GGCGTAATGG AGGGACCTTT
TGATGCAGTT TACTTGATTG GCGCGGACAA TCTGGGAAGC TACGTAGACT GGCTAGATCA
AAACAAGGTG TGTCAATCTC CGAACGTGGT CACAAAGCCG AGCTGTGACG ATCCCGTCCG
GGATGCGATG CCTACTTCAT CCAACATTTC CCCACCAACA GTCCTAGAAC AGGAAGAATC
GCAACTCTAC GACGCCTTGT TTCAATCCGT TACTCAAGGA CAAGTAGCCA TTGCAATGGC
GTTGCTTTCG GTTGGCGCCG ACCCAAATCA AGGAGGACAC GATGGACGGC TGGGTAAAAT
TTCGAGTCGC AACGATCAGA AAATAATCTT TCGCTCGAGT CCGTTACATC TTGCTTGTGT
TAAGGGTATA CCGCTTTTGG TGGAAGCGTT GCTCGCTGAA GGCGCTAGAA TGAATTCACC
GGACGCTTCC GGCTTATTTC CGTTACATTT GGCGGCTGCT GGCGAAGCCA GACGCGAGCT
AGAAGGTGAA GGTCAGGCGG CGGATGATTG TCGTCGTCTG GAATGTGTCA AACTATTAAT
TGCCGCGGGG ACACCACTGT CCATGAAAGA CGGCAGCAAG CAAACGGCTA TACATTGCGC
GGCTCGAGGG GGTCATGTTG CCACATTGAG TTATGTGCTG AAAGAATGGC ACCGTCTTTA
CGGGACGGAT CCCGAAAAGT GCCACGGGGT GAACTGGCGA GATCGATGGC TGCGAACTCC
GGTGCACTGG GCAGTCTTGA ACGGCCACGT AGATGCCTTG GTTGTGCTTC TGCAGCACGG
ATGCGATTCC AATCCTCCCC AACCCAAAAT GAACAAACGG TCCAGTGCGG CCATTGAAAG
CCCCCTACAG ACGTGTGAGA GGTTGTACGG ATCGACGCCC TTGGGCGAAC GTATCAGAGA
GCTGCTACTC GCTGGTAAAC GAGGAATTTT GCGGAGGTGA
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| Protein sequence | MVYLQGPSEQ AAIVWDPSLI HQRSETAVYW DDDMLQPWVK RHASQPSLKF LSYHACQEIH
CCIVNIVRRT LEDLLQKVGD DCAMERSQSE IHPLSVPVAV AIPEGILLPI AIEAVCCLNE
PFFIGNRSCS VVLVPLEPTE GRERLRDMIW DCRPALILTT SVCDTDRLNN IVSTDCRPNA
SVADEGTATL SHPALYRAKS IQFLNLQQHI LDSVGDGNEK AHAASTDLPS ERVTESLDRI
SHIVYTSGST GAPKGCVSSI RALRSYLSSK NTVHNVLTAS TVLLASTISF DPCFSDILAT
FQIGATLAIA PRRTLRESLT HVLHSLQISH VLCTPTLWST LALTGTRPAD LPSLRMIALG
GEPIPLAIVQ AWARALPDDP VHCRLLATYG VTEACVYQSA GEVFRLDCGQ SKGQDVGLLL
PGMRVSICDE SIQESLTEVL PADIAVGEVV LSGSQLDSVC SYLNRPALSI SKYLKSERHW
HYRTGDRGYI DSKTLRLHIT GRINGEDGMV KINGIRIELG EIENALVGST AALATVLDAM
VVPHVHCITA TDLVAYVVLG GDCRQEMGVK GTISSDGVLL PPCPLMVLLR HRCKLKARMI
PAFFIIIPRT PLSPTGKRHR AGLPPLEAAV PFFSILRQGV DAISQYLSQA LLTTDASFAM
LGGDSLAATR VVRALYAAHH CVHNSRHLGG EYGVMEGPFD AVYLIGADNL GSYVDWLDQN
KVCQSPNVVT KPSCDDPVRD AMPTSSNISP PTVLEQEESQ LYDALFQSVT QGQVAIAMAL
LSVGADPNQG GHDGRLGKIS SRNDQKIIFR SSPLHLACVK GIPLLVEALL AEGARMNSPD
ASGLFPLHLA AAGEARRELE GEGQAADDCR RLECVKLLIA AGTPLSMKDG SKQTAIHCAA
RGGHVATLSY VLKEWHRLYG TDPEKCHGVN WRDRWLRTPV HWAVLNGHVD ALVVLLQHGC
DSNPPQPKMN KRSSAAIESP LQTCERLYGS TPLGERIREL LLAGKRGILR R
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