| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49475 |
|---|
| Symbol | |
|---|
| ID | 7195827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011690 |
|---|
| Strand | - |
|---|
| Start bp | 355885 |
|---|
| End bp | 357140 |
|---|
| Gene Length | 1256 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184237 |
|---|
| Protein GI | 219128053 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCT ACATGTTCGG AAAATATCGT TTGCGTGTTC CGCGTTTTAT GGAAGACGAG
AGGGTTCACC GATATTCCGT TGCCTACTTT GTATGCGGAA GCCTACGATC CAGACACTGC
TACTCCAGTG ACTATCACAG AGCGCAAGTT TGGACAAAAC TTGTCGGGCG ACATGATCCC
TGTTCGTGAG GTTCAGGCGG CCGAAGCGAA AAAGGAGAGT ACTGGTTCGT CGGAAAGCAA
GAAGCGAGGG TTTTTACGAC CTCGTCGCCG GAACGGTGCT TGCACGGAGT GGTCTGGTAC
GTGGATTTGT CTCGAAACCG TCAAAGGTCG ATCGTCGATA GTTGTGTCCG TAGCACCCGA
AACCAAACTC CCCCAGAACT AACCATCTCT CTCCCTCTCG CTTCGGACAC TCTCATCAAC
TTTCGTCTAC TCTACAGGAG TCCCCTGGTC AAAACACAAG TGCTACACAC CGTGACACTG
CTGGTGTCCG GGGTACGCGA CCCGTCCGCG TTATACTTTA TTTTATCCCA AAACTGTATC
AATGCATTGA TTGCCTGTAT TTTACCGCCA GCACTGGAGA CCACACCACC ACTCTACGTT
GGCCTCATTA ATGTAAAACC CAGTCGTTAC AGCTGGGTAT ATCACCACCC CAGCTCTTTC
CTTTCTTGGC AGTCCACGAA CCCACGAACG ATCACGTCCA TTTTCCGCTC TCTTCCGTGA
CACTTGACAC GGCCACGAGC GCGTGCGCGT ACGCTCAGTC CAATGCCTAC GTATACTTTA
CCTGTCTTAA TCTGATTGTC GACTTTTTGC AAAATCAGTA CGCACCTATC CGGGAATGGA
TCCGTGGAGC GGAACGAGAA CAATGTCTCT TAGCCAGTCA CCTGGCCGCG TTGCTCCGAC
GGATGTATCA AAGGATTGCC AATCTTGCAA GCGGACCAGT CGTGGACGAC GTGCGCAGTA
ACGCCGTCGT TAGCCAATTG ACAGTGAACG GCCTACACGA AGAAATTGAC GCCCTGAACG
ACGTCTTTTT TTGCGGCATT CAAGGATTGA ATGTTCGGCT TTGCGAAGAT TTCCTGCAGA
CGGTCGTTTT TGTACTTTTT TGTCTGGACT GTTACCATCA CAAGAAGGCA AAGTCTTTGA
TGGTTGGAAT TGTGGATGCC AATGTCATCC CCGAGAAGGA AGCGCAGGCT CAAGTTACGG
TGTCCTTCTC TTGTGAGGTG GTTCTTACAG TTAGAGGCAA CGTATTGATT GATTGA
|
|---|
| Protein sequence | MKRYMFGKYR LRVPRFMEDE RVHRYSVAYF VCGSLRSRHC YSSGRSEKGE YWFVGKQEAR
VFTTSSPERC LHGVVWSPLV KTQVLHTVTL LVSGVRDPSA LYFILSQNCI NALIACILPP
ALETTPPLYV GLINLGISPP QLFPFLAVHE PTNDHVHFPL SSVTLDTATS ACAYAQSNAY
VYFTCLNLIV DFLQNQYAPI REWIRGAERE QCLLASHLAA LLRRMYQRIA NLASGPVVDD
VRSNAVVSQL TVNGLHEEID ALNDVFFCGI QGLNVRLCED FLQTVVFVLF CLDCYHHKKA
KSLMVGIVDA NVIPEKEAQA QVTVSFSCEV VLTVRGNVLI D
|
|---|
| |