| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49474 |
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| Symbol | |
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| ID | 7195825 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011690 |
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| Strand | - |
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| Start bp | 349357 |
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| End bp | 351854 |
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| Gene Length | 2498 bp |
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| Protein Length | 561 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184235 |
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| Protein GI | 219128048 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATGA CTACACAAAG CAAAAACCCA CTCTCAGCAC AGACGTCGTT GAATCCTCTC
AAAGGTGTCT TGTATCCAAT TCAGTTGCAA TTGGGTCAAG GTGTTGTGGT GCTTAGTATC
GCCACGAGCG TTTTTCTTTG GGAGGTATCT TACTACGCCT TTTGGATTAC CATGACGTGT
TTTGCCGGAT CTCTTGTGAT TTGTTGGGTT CCGTGGGGCT GGGTTCTGCG TTGGATCTTT
AGAATTGCAG TGGCTTGTCA TCTCCGGGCC GTGGATGATG ATTGTGGATC AATACTAGTT
GTTTGTGGAA GACCCGAACC TAACGGAGGA GGAAAGGGAG AATGCAGTTA ACTGTAAGGC
CCGTCTCTAG TCCCGCTACA CGGCTGTCTT GCAGGCTGCA ACAAACTACC AGACTCGCAA
AGAACGGGCA ATCAAACTGA AAGACATGAA GCGCTACATG TTCGGAAAAT ATCGTTTGCG
TGTTCCGCGT TTTATGGAAG ACGAGAGGGT TCACCGATAT TCCGTTGCCT ACTTTGTATG
CGGAAGCCTA CGATCCAGAC ACTGCTACTC CAGTGACTAT CACAGAGCGC AAGTTTGGAC
AAAACTTGTC GGGCGACATG ATCCCTGTTC GTGAGGTTCA GGCGGCCGAA GCGAAAAAGG
AGAGTACTGG TTCGTCGGAA AGCAAGAAGC GAGGGTTTTT ACGATCTCGT CGCCGGAACG
GTGCTTGCAC GGAGTGGTCT GGTACGTTGA TTTGTCTCGA AACCGTCAAA GGTCGATCGT
CGATAGTTGT GTCCGTAGCA CCCGAAACCA AACTCCCCCA GAACTAACCA TCTCTCTCCC
TCTCGCTTCG GACACTCTCA TCAACTTTCG TCTACTCTAC AGGAGTCCCC TGGTCAAAAC
ACAAGTGCTA CACACCGTGA CACTGCTGGT GTCCGGGGTA CGCGACCCGT CCGCGTTATA
CTTTATTTTA TCCCAAAACT GTATCAATGC ATTGATTGCC TGTACTTTAC CGCCAGCACT
GGAGACCACA CCAGCACTCT ACGTTGGCCT CATTAATGTA AAACCCAGTC GTTACAGCTG
GGTGGATCAC CACCCCAGCT CTTTCCTTTC TTGGCAGTCC ACGAACCCAC GAACGATCAC
GTCCATTTTC CGCTCTCTTC CGTGACACTT GAGACTGCCA CGAGCGCGTG CGCGTACGCT
CAGTCCAATG CCTACGTATA CTTTACCTGT CTTAATCTGA TTGTCGACTT GATGCAAAAT
CAGTACGCAC CTATCCGGGA ATGGATCCGT GGAGCGGAAC GAGAACAATG TCTCTTAGCC
AGTCACCTGG CCGCGTTGCT CCGACGGATG TATCAAAGGA TTGCCAATCT TGCAACCGGA
CCAGTCGTGG ACGACGTGCG CAGTAACGCC ATTGTTAGCC AATTGACAGT GAACGGCCTA
CACGAAGAAC TTGACGCCCT GAACGACGTC TTCTTTTGCG GCATTCAAGG ATTGAATGTT
CGGCTTTGCG AAGATTTCCT GCAGACGGTC GTTTTTGTAC TTTTTTGTCT GGACTGTTAC
CATCACAAGA AGGCAAAGTC TTTGATGGTT GGAATTGTGG ATGCCGATGT CATCCCCGAG
AAGGAACCGC AGGCTCAAGT TACGGTGTTC GTCTCGGCCA AGCTTTTTCA ACGACTCGAA
TATGCACCCT TGGTGCATAT GCTAGCTGTC GCTCTCCTGC ATTCCCGATC TGCGCCATTC
TGGACGAGCA CCCAACCACA GGGAACACGT TCCCCTGACT ACATCTTTAC CTCTGCCTTG
GACTCAATGG GTTCTTCAGG GGTCAAAATG TTCTTCTTTG TTCCGTATTT TGTAATGACA
TAGATCGTCG AAAATGTATC GCCGGGTTTT GATGAGTGCG ATGCCGAAAA GCTTGACTCG
TTTCATCGCT TGGCCACCTG CTTTCCAACA GGTATTGCCT TTGAAGATTG CAAATTCCAC
CAGCATTGAG AATTATTTGG TCTTTTTGGT GTCAGTCGTC TGACTCTTTA CTCTCTCTCT
CTCTCTCTGT TTCAAGGCCT CATCAATACG GATGTTATCG GCGAAAGTCT CTCGTCCCGC
TGTCACACTG GTGGACTCTT TGACATTGCG CGCTCGACAA ACTTCCATCA AATACGTCCC
ACGCGACGAG ACAACAGTGT TGTTACGAAT GTGGTGTATA CTCGTTCAAA AGTCTACACG
TTTTGCAGTT AGTCAACTCT CCTTTGCATC TGCTCTGAAC CATTTCGGAC AGGTAGAAAT
ACGTGATCTC TGTATTGTCT GTCCTGAATG AACACATGTG CATCTCCCAC ACGATCAATG
GGACATCGAT GACGGCGTTT GCAGGATTGC CGAGAATCAG CCAACAATTG AGAAATGCCG
TAGTCTTCTC GCAGCACTGT ATCCCACAAA GAAAAGACTG CTTTGCTGGT CATTTAGTAT
TGCCTGGTAC GAAGTGCGAC AGAGCGGAGC AATCTGAT
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| Protein sequence | MDMTTQSKNP LSAQTSLNPL KGVLYPIQLQ LGQGVVVLSI ATSVFLWEVS YYAFWITMTC
FAGSLVICWV PWGWVLRWIF RIAVACHLRA VDDDCGSILV VCGRPEPNGG GKGECRFTDI
PLPTLYAEAY DPDTATPVTI TERKFGQNLS GDMIPVREVQ AAEAKKESTG SSESKKRGFL
RSRRRNGACT EWSELTISLP LASDTLINFR LLYRSPLVKT QVLHTVTLLV SGVRDPSALY
FILSQNCINA LIACTLPPAL ETTPALYVGL INLGGSPPQL FPFLAVHEPT NDHVHFPLSS
VTLETATSAC AYAQSNAYVY FTCLNLIVDL MQNQYAPIRE WIRGAEREQC LLASHLAALL
RRMYQRIANL ATGPVVDDVR SNAIVSQLTV NGLHEELDAL NDVFFCGIQG LNVRLCEDFL
QTVVFVLFCL DCYHHKKAKS LMVGIVDADV IPEKEPQAQV TVFVSAKLFQ RLEYAPLVHM
LAVALLHSRS APFWTSTQPQ GTRSPDYIFT SALDSMGSSG IVENVSPGFD ECDAEKLDSF
HRLATCFPTG IAFEDCKFHQ H
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