Gene PHATRDRAFT_49467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49467 
Symbol 
ID7195940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand
Start bp324578 
End bp325845 
Gene Length1268 bp 
Protein Length359 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184113 
Protein GI219127794 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CACAATCCCA ATTACATATT ATAAACCTCA CAATCTTCAG CAAGCACCAT GGCCAAAGTG 
CGCCCACCTC ACACCAACCG CTTAAGAATG ATGCTTCGCA ATATGCCTAG AAAGGAAATG
TCGGCTGCTT TCATTGCCTC TACTCTTTTG CTTCTCATTT TCATGATGAG CTCCGGTACA
GAGACAGACA TGAGCTTCAA GGATGCCTCT CTCAGATCCT TGAAGGCTAT CAGCACTACC
ACGACCATTC CCAGCACCTG CAATGCTGCC TTGAGTTCGG ACTTTGCATC CTCCTCCATG
GTGCCGAAAG TTTCCAATGA CAACGCCAGG AGACTGGCTC AAGGTGGCTA CACGCTCATT
GCTCAGGGTT CTGGACCGGT CGAGCTGGTA GGACTCTTCT CTATGGCCCT ATCCGAGATT
CAGCACTCCA GCAATATTTT TGGCTCTGTT GGAGAACTAG GAGTTCACCA TGGGCGGTTT
ACCAGTTGTC TCTTTATTAC AGCACGCGAA AATGAGAAGC TTGTTATCGC TGACATTTTT
GAACAGCAAA ATAAAAACGA AGATAAAAGT GGCAACGGAG ACAAGGCCAA ATTTATGGAA
GGATTGGCGG TCTATGGACT TGAAGAGAAA GATCTTCACA CGGTATTCAC CGGAAGCACC
CTCGAGATCC CCATGAACTG GTCCCAAAAA AGAAACTTTG AGCCGTTTCG TTTGGTTTCC
GTTGACGCAG GCCACACTGA GCTCCTGACG AAAAATGATA TTACCATTGC CTCTTGCAAT
CTTTTGATAG GTGGCATTAT AGTTCTTGAT GATGTTCTCC ATCCACATTG GCTTGGTGTC
ACCGAAGGAA TCTTCAACTA TTTCCATGAA ATGAAGGGAA ATAGCCGCCA GCAGCTTTAC
CCCTTCTTGC TTTGCAATGG CAAGTTATTT TTGACCAACG ATCTCGCCAG TCACGGCAAA
TATTACAACT CGCTCAAGAA CAACCCAGTC GTCAACATGT TTCTTGCAAC AGATGCGACA
ATGTGGGGGG GAAGTAGTAT GTTTCTCATG AATGAAGCGG AATTTCTATT CTGTCATAGC
CCCGAGTCTT TCAATGCTCA TGACGTATGG GCAAGTCTCG TGTATTAACA CGAGTGGAGC
TTTAGTGGGT GCTGTGGCAT TTGTAATGTA ATGGCGGCTT TTGGCAATAA CCAATCGTGT
AGCACGGATC CTTTTCTTAT CAATCTGTAT AAAGTACAGA ATAATGATAA GAACATTATC
CCGGAGGC
 
Protein sequence
MAKVRPPHTN RLRMMLRNMP RKEMSAAFIA STLLLLIFMM SSGTETDMSF KDASLRSLKA 
ISTTTTIPST CNAALSSDFA SSSMVPKVSN DNARRLAQGG YTLIAQGSGP VELVGLFSMA
LSEIQHSSNI FGSVGELGVH HGRFTSCLFI TARENEKLVI ADIFEQQNKN EDKSGNGDKA
KFMEGLAVYG LEEKDLHTVF TGSTLEIPMN WSQKRNFEPF RLVSVDAGHT ELLTKNDITI
ASCNLLIGGI IVLDDVLHPH WLGVTEGIFN YFHEMKGNSR QQLYPFLLCN GKLFLTNDLA
SHGKYYNSLK NNPVVNMFLA TDATMWGGSS MFLMNEAEFL FCHSPESFNA HDVWASLVY